KEGG   Methylobacterium oryzae: MOC_2301
Entry
MOC_2301          CDS       T03299                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mor  Methylobacterium oryzae
Pathway
mor03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MOC_2301 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mor03021]
    MOC_2301 (rpoZ)
   03400 DNA repair and recombination proteins [BR:mor03400]
    MOC_2301 (rpoZ)
Enzymes [BR:mor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MOC_2301 (rpoZ)
Transcription machinery [BR:mor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MOC_2301 (rpoZ)
DNA repair and recombination proteins [BR:mor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MOC_2301 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6 MinE T2SSS_2
Other DBs
NCBI-ProteinID: AIQ90056
UniProt: A0A089NQ54
Position
complement(2346028..2346438)
AA seq 136 aa
MARVTVEDCIEKVENRFELVLLASHRARLLAAGAPLTIDRDRDKNPVVALREIGDETITA
DDLKEQLIHSMQKYVEVDEPEAETVPLLSSSPAAAAVAPQSSSDDAAVQFDRMSEEDLLR
GLENLAPPVETDDEGE
NT seq 411 nt   +upstreamnt  +downstreamnt
atggcgcgcgtcaccgtcgaagactgcatcgagaaggtcgagaaccgcttcgagctggtg
ctgctggcgagccaccgggcccgcctcctagccgccggcgcccccctgaccatcgaccgc
gaccgcgacaagaaccccgtcgtggccctgcgcgagatcggcgacgagacgatcacggcc
gacgacctcaaggagcagctgatccactcgatgcagaaatacgtcgaggtggacgagccg
gaggccgagaccgtgccgctgctgtcgagctcgccggccgccgccgcggtggcgccccag
tcctccagcgacgacgcggcggtccagttcgaccgcatgagcgaggaagatctgctccgc
ggcctcgagaacctcgccccgccggtcgagaccgacgacgagggcgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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