KEGG T02155: DAMO

Candidatus Methylomirabilis oxygeniifera: DAMO_0707

Entry

DAMO_0707         CDS       T02155

Symbol

gcvPB

Name

(GenBank) putative glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (Glycine cleavage system P-protein subunit 2)

K00283

glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]

Organism

mox Candidatus Methylomirabilis oxygeniifera

Pathway

mox00260

Glycine, serine and threonine metabolism

mox00630

Glyoxylate and dicarboxylate metabolism

mox00785

Lipoic acid metabolism

mox01100

Metabolic pathways

mox01110

Biosynthesis of secondary metabolites

mox01200

Carbon metabolism

Module

mox_M00621

Glycine cleavage system

Brite

KEGG Orthology (KO) [BR:mox00001]
09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    DAMO_0707 (gcvPB)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DAMO_0707 (gcvPB)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DAMO_0707 (gcvPB)
Enzymes [BR:mox01000]
1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     DAMO_0707 (gcvPB)

SSDB

Motif

Pfam:

GcvP2_C GDC-P Aminotran_5 Beta_elim_lyase MHC_II_alpha

Other DBs

NCBI-ProteinID:

CBE67777

UniProt:

D5MLB1

Position

601601..603178

AA seq 525 aa
MTDEVRGKSPLAPLYERGDGGFSCGPSATGENEEVVAQGLAFNEPLLFDQGSRGRVGCTL
PECDVPELKPERLLPRKLLRHDIPGFPELSEVEVVRHFTRLSQWNYGVDTGFYPLGSCTM
KYNPKINEEVWRLPGFSCAHPYQPESLIQGALELMYELEQCLAEVSGMDRVSLQPAAGAQ
GETLGIMLIRAYLESKGNPRKRVLVPDSAHGTNPASSTICGYEVLQIKSGPNGRLDPKAV
ADAMNEDVAAIMVTNPNTLGLFEDQIAEVAKIVHAKGGQVYCDGANLNAIIGISRPGDTG
IDVLHINLHKTFAVPHGGGGPGAGPVGLKAHLAPFMPVPVIEKKGKRFVLNEDLPSSVGK
VRAFYGNFAALVRAYAYIRSLGPSGLRRVAEVAVINANYIMNQLKDYYHLPYDKFCKHEC
VFSDARQLPHGVQTLDIAKRLMDYGFHPPTIYFPLIVKGAMMIEPTETESKETLDQFIAA
MKQIAEEAERDPELVRSAPHKTRVSRLDEAKAARHPDLRWKGKTS

NT seq 1578 nt +upstreamnt +downstreamnt
atgacggatgaggtgcgaggcaaatcccccctcgcccccctttacgaaaggggggatggg
gggttttcatgcgggccaagtgccacaggcgagaacgaggaggtcgttgcccagggactc
gccttcaatgagccgctcctgtttgatcagggatcacgggggcgggtgggctgtacactt
cctgagtgcgacgttccggagctgaaaccggagcggctgcttcccagaaagcttctccgg
cacgacatccccggtttccctgaactctccgaggtcgaggtggtccggcattttacgcgg
ctatcacaatggaattacggagtcgatacgggcttctacccattgggctcctgcaccatg
aagtacaacccgaagatcaatgaggaggtgtggcggctgccgggcttttcatgtgcgcac
ccataccagccggaaagtctgatccagggtgctcttgaactgatgtatgagctggagcag
tgcctggccgaggtgagcgggatggaccgggtgtcactccaaccggccgccggcgcccag
ggggagaccttgggcataatgctgatccgggcgtacctggaatcgaagggcaatccgcgg
aagcgggtcctggtccctgactccgcccatggcaccaatcccgcgagttccaccatctgt
ggctacgaggtgctgcagatcaagtccggcccgaacggccgcctggatcccaaggccgtg
gccgacgccatgaacgaggacgtggccgccatcatggtgacgaaccccaatacccttggg
ctcttcgaggaccagattgctgaggttgccaagatcgttcatgcgaagggcgggcaggtc
tactgcgacggcgccaacctgaatgccatcatcgggatctcacgacctggcgacacggga
atcgacgtgctgcacatcaacctgcataagacgtttgccgttccgcatgggggcggcggt
ccgggcgctggaccggtggggctcaaggcgcatctggcgccattcatgccggtcccggtc
atcgagaagaagggaaagcggttcgtcctgaatgaggacctgccgtcaagcgtcggcaag
gtgcgcgccttctatgggaacttcgcagcactggtccgggcctacgcctacatccgttcg
ctgggtccatcggggctgcgccgcgtggccgaggtggccgtcatcaatgccaattacatc
atgaaccagttgaaagattactaccatctgccatacgacaagttctgcaagcacgagtgc
gtcttctccgatgcgcgtcagcttccgcacggcgtccaaaccctggacatcgccaaacga
ttgatggattacggctttcatcccccaaccatctacttccccttgatcgtcaagggggcc
atgatgatcgagccgaccgagacagagagtaaggagacgctggatcagttcattgccgcc
atgaagcagatcgccgaggaggccgagcgcgacccggagctggttcggtccgccccgcac
aagaccagggtctcgcggctggacgaggcaaaggccgcccgccatccggatctgcgctgg
aagggaaagacatcctga

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