KEGG   Candidatus Methylomirabilis oxygeniifera: DAMO_1179
Entry
DAMO_1179         CDS       T02155                                 
Name
(GenBank) Ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
mox  Candidatus Methylomirabilis oxygeniifera
Pathway
mox00230  Purine metabolism
mox00240  Pyrimidine metabolism
mox01100  Metabolic pathways
mox01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:mox00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    DAMO_1179
   00240 Pyrimidine metabolism
    DAMO_1179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mox03400]
    DAMO_1179
Enzymes [BR:mox01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     DAMO_1179
DNA repair and recombination proteins [BR:mox03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    DAMO_1179
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN LAGLIDADG_3 Intein_splicing TackOD1
Other DBs
NCBI-ProteinID: CBE68239
UniProt: D5MER0
Position
996408..999998
AA seq 1196 aa
MLGKASGSTFHGIEKGVEATQAEGSRPTKNGQWSESAIRVLKERYLIRDATGVKETPEEM
CWRVAVAIAKAEGQWGRSEAEALQVAESFYDVMVDGKFLPNSPTMMNAGKENGMQYSACF
VLPVEDSMEGIFEAVKRAAIIHQSGGGTGFAFSRLRPKDTLVKSTGGKASGPISFLRVFN
AATEAVKQGGARRGANMGILKVDHPDILEFIDCKLDGGITNFNISVATTDTFMDALAKDE
TYELIDPHTKLVTRHLPAREVFQRMVQAAWRTGDPGMIFIDRINASPSNPIPQDELIEAT
NPCVPGDTWIMTDVGPRQVRDLLGKPFRAIVDGTGHASGLDGFFKTGTRPLVRLRTVEGY
SLRLTADHRVRRVTRLTRYASVTEWTEAGQLRPGDRVLLHDHRELTGWGGAYTEGEGYLV
GLLVGDGTLKSDKAVLSVWCPEVVAVANGPSEIGESGTWAVMQTAWKYAESLPHRSDFRG
WLPVPGRTEFRLSLAYLKKLAGEMGMAPGRKDITPIMEQASSAFYQGFLRGLFDADGSVQ
GSQKKGVSIRLSQSDRERLLATQRMLLRLGIVSTLYEGRRPSQVRLLPDQRGGQRGYATA
EQHELVISGDNLLRFAERVGFSDSDKALRLRALCSAYRRTVNRERFTARVVSVTDAGTED
VYDVQVPGIHAFDANGLYAHNCGEQPLGPNDACNLGSINLARFYLPSIPADARVTERIDW
VGLEQVVRTAVRFLDDVIDVNPYPLQDITEEVRNNRRIGLGVMGWADLLLELGVPYDSDE
AVTLGNEIMGFIRRIGHDASEKLAEARGPFPRWSRSIYKGGKPIRNSTVTTIAPTGTISI
IVGCSSGIEPIFAVAFSHIVGDRHLTFVNPIFEEVAKRRGFYSEELMRRVAERGTVRGLE
GVPEDVQRVFVTAHEIEPARHVKMQAAFQKQTDNGVSKTINLPNSATPEDIAKAYMMAYE
LGCLGITVFRDGCKGTQVLHLGTGAKPALSNVEEPAPSLAEEPAVGDAEVSARQGAPQAI
PIVLKTGLEAALKVKPRPRTMKGVTYRAETPLGTAFVTVNQNGEGEPFEVFASVGKAGSD
TSAVSEAIGRLISMVLRLPSPMSPRERVGQIVNQLSGIGGRRQMGFGKDRVRSLPDAIAQ
VLAEHIGLTEPGVQEMQAALGKTTQKAGDMCPDCGSATLVYEEGCQKCYSCGFSEC
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgcttggcaaggcgagcgggtcaacgttccacggaatagaaaagggagtagaggcgacc
caggcggaaggatccagaccgacgaagaatggacagtggagtgaatcagccatccgcgtc
ctcaaagagcgttacctgataagggacgcgacaggtgtcaaggagacgccggaggagatg
tgctggcgggtcgcggtggccatcgccaaggctgaagggcagtggggtagaagtgaggcg
gaagctctccaggttgcggagtcgttttacgatgtcatggttgacgggaagttccttcct
aactctcccacgatgatgaatgccggcaaagagaacgggatgcagtattcggcctgtttt
gtgcttcccgttgaggattctatggaggggatctttgaggcggtcaaaagggcggcgatc
atccatcagtccggcggcgggaccggctttgcgttctcgcgcctcaggccgaaggatacc
ctggtgaagtcaacgggcggtaaggcgagcggtcccatcagcttccttcgggtctttaat
gccgccaccgaagccgtcaagcaagggggtgccaggcgaggcgccaacatggggattctc
aaggtggatcaccctgacatcctggagttcatcgactgtaagctggacggcgggatcacc
aacttcaatatctcggtggctaccaccgacacgttcatggacgcgctggcgaaggacgag
acctacgaattgatcgatccgcacaccaagctcgtcacccgccatcttccggctcgcgag
gtctttcaacggatggtccaggcggcctggcggaccggtgatccgggaatgatcttcatc
gatcgcatcaacgcgagcccgtccaatccgattccccaggatgagctgatcgaggccacg
aacccctgcgtgcctggggatacgtggattatgaccgatgtcggtccacgccaagtccgg
gatcttcttggtaagccgtttcgcgctatcgtggatgggaccggacatgcgagcggactc
gatggctttttcaaaactggcacacgccccttggtacgccttcggaccgttgagggctat
tcgttgcgtctcacggcggaccaccgggtccggagggtgactaggctgacccgctatgcg
tctgtgacggagtggacagaagctgggcaactccgccctggcgatcgagtgctcctccat
gatcaccgggagctgaccggatgggggggagcctatacagaaggcgaggggtatctcgtt
ggtctgttagtcggggacggtactctgaagagcgacaaggcggtcctctcggtgtggtgt
ccggaagtcgtcgctgtcgcaaacggaccgtccgagattggtgagtcaggaacctgggcc
gtgatgcagactgcatggaagtacgcagaatctcttcctcatcggtcggatttcaggggg
tggctgcccgttccgggccggaccgaatttcgtctgtcgctggcctatctaaagaaactc
gcaggcgaaatgggaatggcgcctggacggaaggacattacgcctataatggagcaggcc
tcttcagcattctatcagggattccttcgaggtctgtttgatgccgatggatccgtccag
ggatcgcagaaaaagggagtcagtatccgcttgtcccaaagtgaccgagaacggttgctg
gccacccagcgcatgttgttgcgcctgggcatcgtttccacgctgtatgagggccgccgt
ccgtcacaggttcgcctgctccccgaccagcgaggaggccagcgagggtacgccacggcc
gaacagcacgagcttgtcatctcgggagataatctcctgcgctttgccgagcgtgttggc
ttttctgacagtgacaaggccctcagactgcgggcgttgtgctcagcttacaggcgaacg
gtgaaccgggagcgattcacagcccgagtggtttctgttacagacgcggggacagaagat
gtttatgatgtgcaggtccctgggattcatgccttcgatgctaatggcctttacgcccat
aattgcggtgaacagccgcttggacccaatgacgcctgcaatctgggctcgatcaatctg
gcgagattttatcttccctcgattccggcggatgccagggtgacggagcgaatcgattgg
gttggcctggagcaggtggtgcggacggcagtccgcttcctggacgacgtgatcgacgtg
aacccctatccgctccaggacattaccgaggaggttcgaaacaaccggcggatcggcctc
ggggttatgggctgggccgatctgctgcttgagcttggcgttccctacgacagcgacgag
gcggtgacgctgggtaatgagatcatgggattcattcggcgaatcggccatgacgcttcc
gagaagctggcagaggcgcgagggccgtttccgcgttggtcgcggagcatttacaagggc
gggaaaccgattcgtaattccaccgttacgacgattgcgcccaccgggacgatcagcatc
attgtgggttgctcttccgggatcgagccgatcttcgccgtcgcgttcagccacatcgta
ggagaccggcatctgaccttcgtgaatccgatcttcgaggaggtggcgaagcggcgcggc
ttctacagcgaagagctgatgcggcgggtggccgagcgggggacggttcgcgggcttgaa
ggcgtgccggaagacgttcaacgggtcttcgtcacggcccacgagatcgagcctgcccgg
cacgttaaaatgcaggcagccttccagaagcagaccgataatggcgtctccaagacgatc
aatctgccgaactcggcgacgccggaggatatcgcgaaggcctatatgatggcatatgag
cttggatgtctcgggatcacggtatttcgcgatggctgtaagggcacccaggtcttgcat
ctcggcaccggcgccaagcctgccttgagcaacgtcgaggagcccgcgccgagcttggcc
gaagagcctgccgtaggcgatgccgaagtgtcggcaaggcagggggcgccgcaagcgatc
ccaatcgttttgaagacaggcctggaggccgcgctcaaggtcaagccgaggccgcggacc
atgaagggcgtcacgtatagggcggagacgccgcttggcactgccttcgttaccgtcaac
cagaatggcgaaggggagccgtttgaggtcttcgccagcgtcgggaaggctgggagcgat
acctctgcggtgtccgaggcgatcggtcgactcatctcgatggtcctcaggctgccgtca
ccaatgtcgcccagggagcgggtcgggcagatcgtgaaccaactgtccggcatcggcggc
cggcgacagatggggttcggcaaggatcgggtccgatcgctgccggatgctatcgcccag
gtcctggccgagcatatcggcctcaccgagcccggcgttcaagagatgcaggcagctctt
ggcaagacgacccagaaagcaggcgacatgtgccccgactgtggctcggcaaccctcgtc
tacgaagagggctgtcaaaagtgctactcctgcgggtttagtgaatgctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (49)   

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