KEGG   Microbacterium paludicola: BO218_06015
Entry
BO218_06015       CDS       T04601                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
mpal  Microbacterium paludicola
Pathway
mpal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BO218_06015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpal03019]
    BO218_06015
   03016 Transfer RNA biogenesis [BR:mpal03016]
    BO218_06015
Enzymes [BR:mpal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BO218_06015
Messenger RNA biogenesis [BR:mpal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BO218_06015
Transfer RNA biogenesis [BR:mpal03016]
 Prokaryotic type
  tRNA degradation factors
   BO218_06015
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C KhpA-B_KH KH_2 KH_5
Other DBs
NCBI-ProteinID: APF33804
Position
complement(1244049..1246328)
AA seq 759 aa
MEGPEITAAEAVLDNGRFGTRTVRFETGRLAQQAQGAVAAYLDEETMLLSATSAGKHPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVITVLSIAPGEYYDALAINAASASTQISGLPFSGPIAGVRLALVPGHGEHEDQWVVFPN
QKVVEEAVFDLTVAGRVLPDGEVAIMMVEAEATEGSWNLIKGGAVKPSEEVVAQGLEAAK
PFIKQLVEAQASMAASASREPGVYPVFPPYAPEVYDFVAERAYGELTSVYQIADKQERQN
ADDAIKERVKGEVAAAVEAEQLPASALAEFSAAYKSVTKKIVRGRILSEGVRIDGRGLAD
IRPLDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPTTSKRYLHHYNFP
PYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSV
CASTLSLLNAGVPLRAPVAGIAMGLVSDQVDGETRYAALTDILGAEDALGDMDFKVAGTS
EFVTAIQLDTKLDGIPSSVLSAALTQAKEARLTILGVLNAAIDSPDEMAPTAPRVISVQI
PVDKIGELIGPKGKTINSIQDETGADISIEEDGTVYIGATDGPSAEAARARVNAIANPTN
PEVGEQFLGTVVKIATFGAFISLLPGKDGLLHVSEVRKLAGGKRVENVEDVLGVGQKILV
RITKIDDRGKLSLEPVLEETADQDGSAAASEGPEAPAEG
NT seq 2280 nt   +upstreamnt  +downstreamnt
ttggaaggtccagaaatcaccgcagccgaagccgtcctcgataacggccgcttcggcacc
cgcaccgtccggttcgagaccggacgcctggcacagcaggcgcagggcgccgttgccgcc
tacctcgacgaggagacgatgctcctctcggccaccagcgccggcaagcacccgcgcgaa
ggcttcgacttcttcccgctcaccgtcgacgtcgaagagcgttcgtacgccgccggcaag
atccccggctcgttcttccgtcgcgagggacgcccctcgaccgaggcgatcctcgtctgc
cgtctgatcgaccgtccgctgcgcccgtcgttcgtcgacggcctgcgcaacgaggtccag
atcgtcatcacggtcctctcgatcgcgcccggcgagtactacgacgcgctcgcgatcaac
gcggcgtccgcttcgacgcagatctcggggctgccgttctcgggcccgatcgccggtgtc
cgcctggcactcgttcccggtcacggcgagcacgaggaccagtgggtcgtcttcccgaac
cagaaggtcgtcgaagaggccgtgttcgacctcaccgtcgccggccgggtcctccccgac
ggcgaagtggccatcatgatggtcgaggccgaggcgaccgagggcagctggaacctcatc
aagggcggcgccgtcaagccgagcgaagaggtcgtcgcacagggcctcgaggccgcgaag
cccttcatcaagcagctcgtcgaggcgcaggcttcgatggcggcctccgcgtcgcgtgag
ccgggtgtctaccccgtcttcccgccgtacgcccccgaggtctacgacttcgtcgccgag
cgtgcctacggcgagctgacgagcgtctaccagatcgccgacaagcaggagcgccagaac
gccgacgacgccatcaaggagcgcgtcaagggcgaggtcgccgctgccgtcgaggccgag
cagctcccggcatccgcgctcgcggagttctccgctgcgtacaagtcggtcaccaagaag
atcgtccgcggccgcatcctcagcgagggcgtccgcatcgacggtcgcggcctggccgac
atccgtccgctcgacgccgaggtgcaggtcatcccgcgcgtccacggctcggcgatcttc
cagcgcggcgagacccagatcctgggtgtcaccacgctgaacatgctgaagatggagcag
cagatcgactcgctgtcgcccacgacgagcaagcgctacctgcaccactacaacttcccg
ccctactcgaccggtgagaccggacgcgtcggcagcccgaagcgtcgcgagatcgggcac
ggcttcctcgccgagcgcgccctcgtgccggtgctgcccagccgcgaggagttcccgtac
gcgatccgtcaggtctccgaggccctcgggtcgaacggctcgacctcgatgggctcggtg
tgcgcctcgaccctgtcgctgctgaacgccggtgtgcccctgcgcgccccggtcgcgggc
atcgcgatgggtctcgtctccgaccaggtcgacggtgagacccgctacgcggcgctgacc
gacatcctgggcgccgaggacgcgctcggcgacatggacttcaaggtcgccggcacgagc
gagttcgtcacggccatccagctcgacacgaagctcgacggcatcccgtcgtcggtgctc
tcggcagcgctgacccaggccaaggaggctcgtctgacgatcctcggtgtcctcaacgcc
gcgatcgacagccccgacgagatggcgcccaccgctccgcgcgtcatcagcgtccagatc
ccggtcgacaagatcggcgagctgatcggccccaagggcaagacgatcaactcgatccag
gacgagaccggcgccgacatctcgatcgaggaggacggcaccgtctacatcggcgccacc
gacggcccctcggccgaggccgcccgtgcccgcgtgaacgcgatcgccaaccccaccaac
ccggaggtcggcgagcagttcctcggaaccgtcgtgaagatcgcgacgttcggcgcgttc
atctcgctcctgcccggcaaggacggactgctgcacgtcagcgaggtccgcaagctcgcc
ggcggcaagcgcgtggagaacgtcgaggatgtcctcggtgtcggccagaagatcctcgtt
cgcatcacgaagatcgacgaccgcggcaagctctccctcgagcccgttctcgaagagacc
gctgaccaggacggctcggccgcagcgagcgagggcccggaggctcccgccgaaggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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