KEGG   Microbacterium paludicola: BO218_11025
Entry
BO218_11025       CDS       T04601                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
mpal  Microbacterium paludicola
Brite
KEGG Orthology (KO) [BR:mpal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpal03032]
    BO218_11025
   03400 DNA repair and recombination proteins [BR:mpal03400]
    BO218_11025
Enzymes [BR:mpal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BO218_11025
DNA replication proteins [BR:mpal03032]
 Prokaryotic type
  DNA Topoisomerases
   BO218_11025
DNA repair and recombination proteins [BR:mpal03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BO218_11025
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim
Other DBs
NCBI-ProteinID: APF34653
Position
complement(2329526..2331583)
AA seq 685 aa
MTSQNPDSVPEDPETPDAAEATSAKVPNEYGADAIQVLEGLEAVRKRPGMYIGSTGERGL
HHLVYEIVDNAVDEALAGYCDTIHVTILEDGGLRVVDNGRGIPVDPHASDPTKSTVEVVL
TVLHAGGKFGGGGYAVSGGLHGVGSSVVNALSTRFEVEIKRQGSVWRQTFADGGKPQAPL
AKGEDSEETGTTVTFWPDGDIFETIAFDYDTLRTRFQQTAFLNKGLRITLTDERPEAAVV
VDLEEGGSESQQRHDDFHYERGLVDYVEYLNKLRKSEVVNDEIIEIESEDTVRHISLELA
MQWTTSYTENVFTFANTINTHEGGTHEEGFRAALTTRVNAYAREKGLLKEKDDNLTGDDI
REGLTAVISVKLSEPQFEGQTKTKLGNTEAKAFVQKIVGDQLTDWLDRNPAQAKRVIMKA
VDAATARLAARKARETARRKSVFESASMPDKLKDCTSKDPSISEIFLVEGDSAGGSAVRG
RDPETQAILSLRGKVLNVEKARLDRALGNNEIQAIISAFGTGIGEDFAVEKARYHKIVLM
ADADVDGQHITTLLLTLLFRYMRGLIEAGYVYLAMPPLYRLKWTNADHEYVFSDKERDAL
LADGLANGKRIPKESGIQRYKGLGEMNPKELWETTMDHSTRTLRQVTIDDAAAADEIFSV
LMGEDVESRRTFIQRNAKDVRFLDI
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgacgtctcagaatcccgacagcgttcccgaagaccccgaaacccccgacgcggccgag
gcgacctcggccaaggtcccgaacgagtacggcgctgacgcgatccaggtgctcgagggc
ctcgaggcggtccggaagcgtccgggaatgtacatcggatccaccggtgagcgtggcctg
caccacctcgtctacgagatcgtcgacaacgccgtcgatgaggcgctggccggctactgc
gacacgatccacgtgacgatcctcgaagacggcggtcttcgcgtcgtcgacaacggccgc
ggcatcccggtcgatccgcacgcctccgacccgacgaagtcgaccgtcgaggtcgtgctg
acggtgctgcacgccggcggaaagttcggcggcggcgggtacgccgtctccggtgggctc
cacggcgtcggatcgtcggtcgtcaacgcgctttcgacgcgcttcgaggtcgagatcaag
cgtcagggctcggtgtggcgtcagaccttcgccgacggcggcaagccgcaggctcccctc
gccaagggcgaggacagcgaagagaccggaacgacggtcaccttctggcccgacggcgac
atcttcgagacgatcgccttcgactacgacacgcttcgcacgcgcttccagcagacggcg
ttcctgaacaaggggctgcgcatcacgctgaccgacgagcgccccgaggcggccgtcgtc
gtcgacctcgaggaaggcggatccgagtcgcagcagcgtcacgacgacttccactacgag
cggggcctcgtcgactacgtcgagtacctcaacaagctgcgcaagagcgaggtcgtcaac
gacgagatcatcgagatcgagtccgaggacacggtgcgtcacatctcgctcgagctcgcg
atgcagtggaccacgagctacaccgagaacgtgttcacctttgcgaacacgatcaacacc
cacgagggcggcacgcacgaagagggtttccgggccgcgctgaccacgcgcgtcaacgcc
tacgcccgcgagaagggcctgctcaaggagaaggacgacaacctcacgggtgacgacatc
cgtgagggtctgaccgccgtcatctccgtcaagctctccgagccgcagttcgagggccag
accaagacgaagctcggcaacaccgaggcgaaggcattcgtccagaagatcgtcggcgac
cagctcaccgactggctcgaccggaaccccgctcaggccaagcgcgtcatcatgaaggcc
gtggatgccgcgaccgcgcgcctcgcggctcgcaaggcgcgtgagaccgcccgccgcaag
agcgtcttcgagtcggcgtcgatgcccgacaagctcaaggactgcacgagcaaggacccg
tcgatctccgagatcttcctcgtcgagggcgactcggccggcggttcggccgtgcgcggc
cgcgatcccgagacccaggcgatcctctcgctccgcggcaaggtgctcaacgtcgagaag
gcgcggctcgaccgcgccctcggcaacaacgagatccaggcgatcatctcggcgttcggc
accggcatcggcgaggacttcgccgtcgagaaggcgcgctatcacaagatcgtgctgatg
gccgatgccgacgtcgacgggcagcacatcacgacgctgctcctgacgctcctgttccgt
tacatgcgcgggctcatcgaagcgggctacgtctacctcgcgatgccgccgctgtaccgg
ctcaagtggaccaacgccgatcacgagtacgtgttcagcgacaaggagcgcgacgcgctc
ctggccgacgggctcgccaacggcaagcgcatcccgaaggagtcgggcatccagcgctac
aagggtctcggcgagatgaacccgaaggagctgtgggagaccacgatggaccacagcacg
cgcaccctgcgccaggtgacgatcgacgacgcggctgccgccgacgagatcttctcggtg
ctcatgggcgaggacgtcgagtcccgccgcaccttcatccagcgcaacgccaaggacgtc
cgcttcctcgacatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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