KEGG   Microbacterium paludicola: BO218_13000
Entry
BO218_13000       CDS       T04601                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mpal  Microbacterium paludicola
Pathway
mpal03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mpal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BO218_13000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpal03021]
    BO218_13000
   03400 DNA repair and recombination proteins [BR:mpal03400]
    BO218_13000
Enzymes [BR:mpal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BO218_13000
Transcription machinery [BR:mpal03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BO218_13000
DNA repair and recombination proteins [BR:mpal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BO218_13000
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: APF34996
Position
2742160..2745654
AA seq 1164 aa
MAAASNASTTTPKNGRGASRLSFAKISDKLTVPDLLALQTESFDWLVGNDAWKARLAEAQ
AAGRTDVALQSGLEEIFEEISPIEDLGETMQLSFTNPYLEPEKYSIEECKERGKTYAAPL
YVEAEFMNHLTGEIKTQTVFMGDFPLQTGKGTFIINGTERVVVSQLVRSPGVYFDKTPDK
TSDKDIVSARVIPSRGAWLEFEIDKRDQVGVRIDRKRKQSVTVFLKALGLTSEDIMAEFA
GYDSIEETLAKDTILTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNAKRYDLAKVGR
YKINQKLGLDTPIEESVLTVADIVATIKYLVRLHRGDATFEGVRDGKPAEIRLDTDDIDN
FGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFG
TSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRERAGVEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLASFARINAFGFIETPYRRVVDGKVTDEIDYLTASEENDYVVAQAGVELNKDG
SFVADRVLARRGKGGEVDLFPNEEIGYMDVSPRQMVSVATSLIPFLEHDDANRALMGANM
QRQAVPLLRSDSPLVGTGMEGYAAIDAGDVITAQKAGVVSEVSADVVTVQLDEGGTQDYF
LRKFDRSNQGTSYNQRVVVSAGERVEVGEVIADGPATENGELALGKNLLVAFMTWEGHNF
EDAIILSQELVKNDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVAPDLLKDLDERGIIR
IGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIAVK
EFNAEDGDDELGSGVNRRVVVYIAQKRKITEGDKLAGRHGNKGVIAKILPVEDMPFLADG
TPVDVVLNPLGIPGRMNFGQVLELHLGWIAAQGWKVEGNPEWAERLPEIAREAAPGTKVA
TPVFDGAFESEIAGLLDSTNLTRDGERLIDSSGKTKLFDGRSGEPFPAPISVGYMYILKL
HHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKS
DDIVGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTEVNLRDTDDE
AFRAAEELGINISSRFESSSIDEI
NT seq 3495 nt   +upstreamnt  +downstreamnt
ttggctgctgcgagcaacgcatccaccaccacccccaagaacggtcgcggcgcttcccgc
ctctcgttcgcgaagatctccgacaagctgacggtccccgacctgctggcgctgcagacg
gagtctttcgactggctcgtcggcaacgacgcctggaaggcccgcctcgccgaggcgcag
gccgccggccgcaccgacgtcgccctccagagcggcctcgaggagatcttcgaggagatc
tcgcccatcgaggacctcggcgagacgatgcagctgtcgttcaccaacccctacctcgag
cccgagaagtactccatcgaggagtgcaaggagcgcggcaagacctacgcggccccgctc
tacgtcgaggccgagttcatgaaccacctcaccggtgagatcaagacccagacggtcttc
atgggcgacttcccgctccagaccggcaagggcaccttcatcatcaacggcaccgagcgc
gtcgtcgtgtcgcagctcgtgcgctcgcccggtgtctacttcgacaagacgcccgacaag
acctccgacaaggacatcgtctcggcgcgcgtcatcccctcgcgcggtgcgtggctcgag
ttcgagatcgacaagcgcgaccaggtcggcgtccgcatcgaccgcaagcgcaagcagtcg
gtcaccgtcttcctcaaggccctgggtctgaccagcgaagacatcatggccgagttcgcc
gggtacgactcgatcgaggagaccctcgcgaaggacacgatcctcaccaaggaggacgcg
ctccgcgacatctaccgcaagctccgtccgggcgagcaggtcgccgccgaggcagcccgc
gcgctcctcgacaacttctacttcaacgccaagcgctacgacctcgccaaggtcggccgc
tacaagatcaaccagaagctgggtctcgacaccccgatcgaggagtcggtgctcaccgtc
gccgacatcgtcgcgaccatcaagtacctggttcgcctgcaccgcggcgacgccaccttc
gagggcgtccgcgacggcaagcccgctgagatccgcctcgacaccgacgacatcgacaac
ttcggcaaccgtcgtatccgcgccgtcggcgagctcatccagaaccaggtccgcaccggt
ctgtcgcgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggacatcgaggcgatc
acgccgcagaccctgatcaacgtgcgcccggtcgtcgccgcgatcaaggagttcttcgga
acctcgcagctgtcgcagttcatggaccagaacaacccgctcgcgggtctgacccacaag
cgccgcctgtcggcgctcggccccggcggtctgtcgcgtgagcgcgccggcgtcgaggtc
cgcgacgtccacccctcgcactacggccgcatgtgcccgatcgagacgccggaaggcccg
aacatcggtctgatcggctcgctcgcctccttcgcgcgcatcaacgcgttcggcttcatc
gagaccccgtaccgtcgtgtcgtcgacggcaaggtcaccgacgagatcgactacctcacc
gccagcgaggagaacgactacgtcgtcgcgcaggccggtgtcgagctcaacaaggacggc
tcgttcgtggccgaccgcgtcctcgcccgccgcggtaagggcggcgaggtcgacctcttc
ccgaacgaggagatcggctacatggacgtctcgccgcgccagatggtgtcggtggcgacc
tcgctcatccccttcctcgagcacgacgacgcgaaccgcgccctcatgggtgcgaacatg
cagcgtcaggccgtgccgctgctgcgcagcgactcgcccctggtcggaaccggtatggag
ggctacgctgcgatcgacgccggcgacgtcatcaccgcgcagaaggccggtgtcgtctcc
gaggtctcggccgacgtcgtcacggtgcagctcgacgagggcggcacgcaggactacttc
ctccgcaagttcgaccgttcgaaccagggcacgtcgtacaaccagcgcgtcgtggtctcg
gccggtgagcgcgtcgaggtcggcgaggtcatcgccgacggtcccgccacggagaacggc
gagctcgcgctcggcaagaacctcctcgtcgcattcatgacgtgggagggtcacaacttc
gaggacgcgatcatcctcagccaggagctcgtgaagaacgacacgctctcctcgatccac
atcgaggagtacgaggtcgacgcccgcgacaccaagctcggcaaggaggagatcacccgt
gacctccccaacgtcgcgcccgacctgctgaaggacctcgacgagcgcggcatcatccgc
atcggtgccgaggtgcgccccggcgacatcctcgtcggcaaggtcacgcccaagggcgag
accgagctgtcggccgaggagcgtctgctccgcgcgatcttcaacgagaagagccgcgag
gtccgcgacacgtcgctgaaggtgcctcacggtgagcagggcacgatcatcgcggtcaag
gagttcaacgccgaggacggcgacgacgagctcggctcgggcgtcaaccgccgcgtcgtg
gtgtacatcgcccagaagcgcaagatcaccgagggcgacaagctcgccggccgccacggc
aacaagggtgtcatcgcgaagatcctccccgtcgaggacatgcccttcctcgccgacggc
acgccggtcgacgtcgtgctgaacccgctcggcatcccgggtcgaatgaacttcggccag
gtcctcgagctgcacctcggctggatcgccgcccagggctggaaggtcgagggcaacccc
gagtgggccgagcgcctgcccgagatcgcccgcgaggccgctcccggcacgaaggtcgcg
acgcccgtgttcgacggcgcgttcgagtccgagatcgccgggctcctcgactcgacgaac
ctcacccgcgacggtgagcgtctcatcgactcctcgggcaagacgaagctgttcgacggt
cgctccggcgagccgttcccggctccgatctcggtcggctacatgtacatcctgaagctc
caccacctcgtcgacgacaagatccacgcgcgttcgacgggcccgtactcgatgatcacc
cagcagccgctcggtggtaaggcgcagttcggtggccagcgcttcggtgagatggaggtg
tgggccctcgaggcctacggcgccgcgtacgccctccaggagctcctgacgatcaagtcc
gacgacatcgtcggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccag
gagcccggcatccccgagtcgttcaaggtgctcatgaaggagatgcagtcgctctgcctg
aacgtcgaggtcctctcggccgacggcaccgaggtcaacctccgcgacaccgatgacgag
gccttccgcgcagcggaggagctcggcatcaacatctccagccgcttcgagtcctcgtcg
atcgacgagatctga

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