KEGG T01142: MCP

Methanocella paludicola: MCP_2125

Entry

MCP_2125 CDS T01142

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mpd Methanocella paludicola

Pathway

mpd03410	Base excision repair
mpd03420	Nucleotide excision repair
mpd03430	Mismatch repair
mpd03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mpd03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mpd03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mpd03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mpd03450]

SSDB

Motif

Pfam:

DNA_primase_S DUF348

Other DBs

NCBI-GI:

NCBI-GeneID:

NITE:

UniProt:

Position

complement(2107937..2108824)

AA seq 295 aa
MTEVLHIEGHDIKVTNPDKVLFPEDGITKGELVDYYRRISGVMVPLVRGRPMTMQRFPDG
IGKEGFFQKEASDYFPDWVHRATLELGKGGIQHQVVCDDAATLVYLASQAMITPHVFLSR
IDKVHYPDRLIFDLDPPDNNFETVRSAAKTIREALDAEGYPVYLMTTGSRGLHVVVPLDR
SADFDTVRAFARGFGEKLTKKYPDRFTIELSKEKRRGRLFLDYLRNSYGQTGVAPYGVRA
RSGAPVATPITWDELDDISGSQEYNIRNIMGRMDKRGDAWKYIDKDRTSIKNLDN

NT seq 888 nt +upstreamnt +downstreamnt
atgaccgaagtattgcacatcgaaggccacgacatcaaagtaactaatccggataaggta
ttattcccggaggacggcatcaccaaaggggagctcgtcgactattaccggcgtatctca
ggtgtgatggtgcccctggtccgggggcggcccatgaccatgcagcgtttcccggacggc
atcggcaaagaaggctttttccagaaagaggcgtccgactatttccccgactgggtgcac
cgcgccacgctcgagctgggaaagggcggcatccagcaccaggtcgtctgtgacgacgcc
gcgacgctcgtatacctggccagccaggcgatgatcactccccacgtctttctcagccga
atcgataaagtccattaccctgaccgcctcatcttcgacctcgacccgcccgataataac
ttcgagaccgtgcggtctgccgctaagacgatccgcgaggcgctcgatgccgaaggctat
cccgtctatctcatgaccactggctcccggggcctgcacgtcgtcgtgccgctcgaccgg
agcgccgacttcgataccgtccgggcgttcgcccggggcttcggcgagaagcttactaag
aagtatcccgaccgcttcactatcgaactctcgaaagagaagcgccgtggccgcctgttc
ctggactatctgcggaactcgtatggtcagaccggcgtggcgccctacggtgtccgggcc
aggagcggagcgcccgtcgccactcccataacatgggatgagcttgatgatatttcgggt
tcgcaggagtacaatatccggaatatcatgggtaggatggataagcgaggcgatgcctgg
aaatatatagataaggataggacgagcataaaaaaccttgataattaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   NITE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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