KEGG   Microlunatus phosphovorus: MLP_16000
Entry
MLP_16000         CDS       T01535                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mph  Microlunatus phosphovorus
Pathway
mph03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mph00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MLP_16000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mph03019]
    MLP_16000
Messenger RNA biogenesis [BR:mph03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MLP_16000
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 FGase
Other DBs
NCBI-ProteinID: BAK34614
UniProt: F5XRC4
Position
1729947..1731656
AA seq 569 aa
MSPGSHQSRPRGGVRIPPPLAGGALRVIPLGGLGDIGRNMAVLEYDGQLLIIDCGVLFPE
DDHPGVDLILPSFDVIADRLDDVQALVLTHGHEDHIGAVPYLLRQRPDIPLVGSKLTLAL
LQEKIREHRIRGTVTRVVTDGEKATFGAFACEFLAVNHSIPDALAVAVRTPAGLVLHTGD
FKMDQLPLDGRITDLRGFARLGEEGVDLFMVDSTNAEVPGFTTPERDITPALDRVFATSK
QRLIVACFASHVHRVQQVLDAAVEHGRKVVYVGRSMVRNMGVARDLGYLRVPGDTLIELR
DIDNYRPDEVVIISTGSQGEPLSALSRMANREHPVIQLTAGDTVVLASSLIPGNESSVYR
VINGLTKLGAKVVHKGNAMVHVSGHASAGELLYAYNIVKPRNVMPVHGEARHLLANADLA
VATGVPRNRAIIADDGSVIDLQQGQARIVGKVDCGYIFVDGASVGDITETELTDRRILGE
EGFISVIVVVNTHSAKIISGPDIHARGFGEDDSVFDSVRPQIVQALEEALADGVDDAHRL
QQVIRRRIGRWVNDKHRRRPMIIPVVIQT
NT seq 1710 nt   +upstreamnt  +downstreamnt
gtgtcgccaggatcgcatcagtcaagaccgcgaggaggcgtccgcattccgcctcctctt
gccggcggagcgctgcgggtcatcccactcggcggcctcggcgacatcggtcgcaacatg
gccgtgttggagtatgacgggcaactgctgatcatcgactgcggggtgttgttccccgag
gacgatcaccctggggtcgacctgatcctgccgagcttcgatgtcatcgcggaccgcctg
gacgatgtccaggcgctggtgctgacccatgggcacgaggaccacatcggcgccgtgccc
tacctgctgcggcagcggcccgacatcccgttggtcggctccaaactcaccctggcgttg
ttgcaggagaagatccgcgagcaccggatccggggcaccgtcacccgggtggtcaccgac
ggtgagaaggcgaccttcggcgcgttcgcgtgcgagttcctggcggtcaaccactcgatc
cctgatgcgctggcggtggcagtgcgtacgcccgccgggctggtactgcacaccggcgac
ttcaagatggaccaactgccgctggacgggcggatcaccgacctgcgcggcttcgcccgc
ctcggggaggagggggtcgacctgttcatggtcgactccaccaatgccgaggtgcccggc
ttcacgaccccggagcgggacatcacgccggcgttggaccgggtgttcgcgaccagcaag
cagcggctgatcgtcgcgtgcttcgcctcccatgtgcaccgggtgcaacaggtgctcgac
gccgcggtcgagcacgggcgcaaggtcgtctacgtcggtcgctcgatggtgcgcaacatg
ggggtggccagggatctcggctatctgcgcgtgcccggcgacaccttgatcgagctccgc
gacatcgacaactatcggccagacgaggtggtgatcatctccaccgggtcgcagggtgag
ccgctgtcggcgttgtcccggatggcgaatcgggagcacccggtcatccagctcaccgcc
ggtgacaccgtggtgctggcctcctcgctcattccgggcaacgagagctcggtctaccgg
gtgatcaacgggctcaccaagctcggtgccaaggttgtgcacaagggcaatgcgatggtg
cacgtctccggtcacgccagtgccggggaactgctgtacgcctacaacatcgtcaagccg
cgcaatgtcatgccggtgcacggtgaggcccggcacctgctcgccaatgcggacctggcg
gtcgccaccggcgtaccccggaatcgggcgatcatcgccgacgacggctcggtgatcgac
ctgcagcaaggtcaggcacgaatcgtcggcaaggtggactgcggctacatcttcgtcgac
ggggcgagtgtcggcgatatcaccgagaccgagttgaccgatcgccggatcctcggcgag
gaaggcttcatctcggtgatcgtggtggtgaacacccattccgccaagatcatcagcgga
cccgacatccacgcccgcgggttcggtgaggacgactcggtcttcgactccgtacgcccg
cagatcgtgcaagccctcgaggaggcactcgccgacggggtcgacgacgcgcatcggctg
cagcaggtcatccggcgccggatcggtcgctgggtgaatgacaagcaccgccgccggccg
atgatcatcccggtggtcatccagacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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