KEGG T04968: MCBMB27

Methylobacterium phyllosphaerae: MCBMB27_00402

Entry

MCBMB27_00402     CDS       T04968

Name

(GenBank) uvrABC system protein B

K03702

excinuclease ABC subunit B

Organism

mphy Methylobacterium phyllosphaerae

Pathway

mphy03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:mphy00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MCBMB27_00402
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mphy03400]
    MCBMB27_00402
DNA repair and recombination proteins [BR:mphy03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MCBMB27_00402
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MCBMB27_00402

SSDB

Motif

Pfam:

UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 DUF87 AAA_22 UB2H MutS_II Microtub_bd Kinesin

Other DBs

NCBI-ProteinID:

APT29693

Position

341791..344553

AA seq 920 aa
MPAPKKPRAASVSASSAKASKPELKPLDTYLAELLNPALNRNRPAAVEPPPEPPARPGKP
KGRAGKDGTKAAARRGAIARDGFAEAPQAGYALGDAADVDPRLAQALGLTPPEDGPVPEG
ADLPDPGDDGGASATVSALERLLTEGNPLFKDGQTWVPHRPERPKKSEGGVRFTLKSEFK
PAGDQPKAIAELVGGVQGLERDQVLLGVTGSGKTFTMAKIIEETQRPALILAPNKTLAAQ
LYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHAATRALLE
RDDVIIVASVSCIYGIGSVETYTAMSFTVSLGERIEQRQLIADLVALQYKRIQSDFARGT
FRVRGDSIELWPAHLEDRGWRIGLFGDEVESIVEFDPLTGKTISELKFVKVYANSHYVTP
RPTLQQAIKGIKNELNGRIEELTKMGRLIEAQRIDQRCTFDIEMIEATGACNGIENYSRY
LTGRKPGEPPPTLFEYLPDNALVFTDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCL
DNRPLRFEEWDAMRPQTVHVSATPGKWEMEQTGGVFAEQVIRPTGLVDPVIEIRPARSQV
DDLLGEVREVAQAGYRTLVTTLTKRMAEDLTEYLHENSVRVRYMHSDIDTLERIEIIRDL
RLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARNADARCIL
YADNITGSMERAMAETERRRTKQLAYNEEHGITPQSVKRGIADILSSVFERDHVQVDTGL
AKDAITVGHNLKAVMADLEKRMRAAAADLDFEEAARLRDELKRLQATELLVSDDPMARQS
DVEREAGKFGRKAPRGAGGAGGGGSRIAKPDLDNMGPGTDRELPVGGLAPAWQERPKPRS
TQGLGGQKPKYKGGGGRRRG

NT seq 2763 nt +upstreamnt +downstreamnt
atgccagcaccgaagaaaccgcgcgccgcttccgtttcggcgtcgtccgccaaggcgtcg
aagcccgagctcaagccgctcgacacctatctggccgagctcctgaacccggcactcaac
cggaaccggccggccgccgtcgagccgccccccgagccgcccgcgcggccgggcaagccg
aaaggacgagccggcaaggacggcaccaaggccgccgcgcgccggggcgcgatcgcccgc
gacggcttcgcggaggctccgcaggccggctacgccctcggcgacgcggccgatgtcgat
ccgcgcctcgcccaagcgctcggcctgacgccgccggaggacggtccggtgcccgagggc
gccgacctgccggatcccggcgacgacggcggcgcctccgcgacggtgtcggccctggag
cggctgctcaccgagggcaacccgctgttcaaggacggccagacctgggtcccgcaccgc
ccggagcgaccgaagaaatccgagggtggcgtccggttcacgctgaaatccgagttcaag
cccgccggtgaccagccgaaagcgatcgccgaactcgtcggcggcgtgcagggactcgag
cgcgatcaggtgctgctcggcgtcaccggctcgggcaagaccttcacgatggccaagatc
atcgaggagacccagcgcccggccctgatcctggcgcccaacaagacgctggccgcgcag
ctctacggggagttcaaggcgttcttcccggacaacgccgtcgagtacttcgtctcctac
tacgactattaccagcccgaggcttacgtcccgcgctccgacacgttcatcgagaaggaa
tcctcgatcaacgagcagatcgaccggatgcgccacgccgccacccgcgccctgctggag
cgggacgacgtcatcatcgtcgcctcggtctcgtgcatctacggcatcggctcggtcgag
acctacacggcgatgtccttcaccgtctcgctcggcgagcggatcgagcagcgccagctc
atcgccgacctcgtggccctgcagtacaagcggatccagtcggatttcgcccgcggcacc
ttccgggtgcgcggcgattccatcgagctgtggcccgcccacttggaagaccgcggctgg
cgcatcggcctgttcggcgacgaggtcgagagcatcgtcgagttcgatccgctcaccggc
aagacgatctccgaactgaagttcgtgaaggtctacgccaactcgcactacgtgacgccg
cgcccgacgctgcagcaggcgatcaagggcatcaagaacgagctgaacggccggatcgag
gagcttaccaagatgggccgcctcatcgaggcgcagcgcatcgaccagcgctgcaccttc
gacatcgagatgatcgaggccaccggcgcctgcaacggcatcgagaactattcccgctac
ctcaccggccggaagcccggcgagccgccgccgaccctgttcgagtacctgcccgacaac
gccctggtcttcaccgacgagagccacgtcacggtgccgcagatcggcggcatgtaccgg
ggcgacttccgccggaaggcgacgctcgccgaatacggcttccggctgccttcctgcctc
gacaaccgccccctgcgcttcgaggaatgggacgcgatgcgcccgcagacggtccacgtc
tcggcgacgccgggcaagtgggagatggagcagacggggggcgtcttcgccgagcaggtg
atccgcccgacggggctcgtggatccggtgatcgagatccgcccggcccgcagccaagtg
gacgacctgctgggcgaggtccgcgaagtcgcgcaggccggctaccggactctcgtgacc
acgctcaccaagcgcatggccgaggacctcaccgagtatctccacgagaacagcgtgcgg
gtgcgctacatgcactccgacatcgacacgctggagcgcatcgagatcatccgcgacctg
cggctcggtgccttcgacgtgctgatcggcatcaacctcctgcgcgagggcctcgacatc
ccggaatgcgccctggtggcgatcctcgacgccgacaaggagggcttcctccgctcggag
acctctctgatccagaccatcggccgcgccgcccgcaacgccgacgcgcgctgcatcctg
tacgcggacaacatcaccggctcgatggagcgggcgatggccgagaccgagcggcgccgc
accaagcagctcgcctacaacgaagagcacgggatcacgccgcagagcgtgaagcgcggc
atcgccgacatcctgagcagcgtgttcgagcgcgaccacgtccaggtcgataccgggctg
gccaaggacgcgatcacggtgggccacaacctcaaggccgtgatggcggatctggagaag
cgcatgcgcgccgccgccgccgatctcgacttcgaggaggcagcccgcctgcgcgacgag
ctgaagcggctccaggccaccgagcttctggtctcggacgacccgatggcacgacagagc
gacgtggagcgcgaggccggaaagttcggccggaaggcgccgcgcggggcagggggcgca
ggcggaggcggcagccgcatcgccaagcccgacctcgacaatatgggccccggcacggac
cgggagcttccggtgggcggcctcgcgccggcttggcaggagcggccgaagccgcgctcg
acgcaggggctcggcgggcagaagcccaaatacaagggcggcggcggacggcggcggggc
tga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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