KEGG T00760: Mpop

Methylobacterium populi: Mpop_0008

Entry

Mpop_0008 CDS T00760

Definition

helicase, RecD/TraA family

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

mpo Methylobacterium populi

Pathway

mpo03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:mpo03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 HHH_5 AAA_11 Viral_helicase1 Helicase_RecD HHH_2 AAA_29 AAA_16 PIF1 AAA_28 AAA_22 NTPase_1 IstB_IS21 AAA_10 ArgK MobB T2SE HHH AAA_23 AAA DUF258 DUF853 TrwB_AAD_bind DUF3558 DEAD

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

8864..11047

AA seq 727 aa
MNAPVRPPDLDVLAGSVERVTFHSAETGFCVLKVHARGRRDLVPVVGHAPAIAAGEWLTA
AGRWTTDREHGLQFRAETLQVTPPTGIEGIERYLASGQMRGIGPMMAKRIVAAFGEAVFE
IIEAEPARLTEVEGIGRKRAARIVKGWAEQKAVREIMIFLHAHGVGTARATRIFRTYGGD
SLKVMAEDPYRLARDIRGIGFRTADSIALRLGLARDAPQRLAAGVSYALQKAMDEGHCGL
PVERLVRLAADLLEVAPDLVRVAAALVLREGREVVADTLRGEPCLFLKGLHGAERAIAMR
MVERATGAPPWPEIDFALARPWVEAKTGKTLSASQAEAVGLVLRSKLCVLTGGPGVGKTS
TLDAILRILTAKGVRVLLAAPTGRAAKRMAEQTGLEARTLHRLLEIDPRNGGFQRGEDNP
LDCDLLVIDETSMVDVPLMHAVLKAVPERAGLILVGDVDQLPSVGPGQVLADLIASGRVP
VARLTEIFRQAAQSRIVVNAHSINTGRMPVTAPKGEESDFYLVEIEDAEAGVETLIDLVT
RRIPRRFGLDPARDIQVLTPMIRGSLGSRNLNHALQRVLNPSPPAQVERFGWRFAPGDRV
METRNDYDRDVFNGDLGTVSAIDAEEEALVVDFDGRPVIYPFGELDTLVPAFATTIHKAQ
GSEYPAVVIPVVTQHRTMLARNLLYTGVTRGRRLVVLVGQRRAVGLAIREGAARRRWTKL
REWLETA

NT seq 2184 nt +upstreamnt +downstreamnt
atgaacgcgccggtgcggccacccgacctcgacgtgttggcgggctcggtcgagcgcgtc
actttccacagcgccgagacgggattctgcgtcctgaaggtccatgcccgcggccggcgc
gatctcgtgccggtggtgggccatgcgccggccattgccgcgggcgagtggctgacggcg
gcgggccgctggaccacggatcgcgagcacggcctccagttccgcgccgagacgctccag
gtcacaccgccgaccggcatcgaggggatcgaacgttatctcgcctcggggcagatgcgc
ggcatcggcccgatgatggccaagcgcatcgtcgcggccttcggcgaggcggtgttcgag
atcatcgaggccgagcccgcccgcctcaccgaggtcgagggcatcggccgcaagcgcgcc
gcccgcatcgtcaagggctgggccgagcagaaggcggtgcgggagatcatgatcttcctg
cacgcccacggcgtcggcaccgcgcgggcgacccgcatcttccgcacctatggcggcgat
tcgctgaaggtcatggcggaggatccgtaccgcctcgcccgcgacatccgcggcatcggc
ttccgcacggcggattccatcgcactgcgcctcggcctcgctcgcgacgcgccgcagcgg
ctcgccgcgggcgtgtcctacgcgcttcagaaggcgatggacgagggccattgcgggttg
cccgtcgagcggctggtgcggctcgccgccgatctcctcgaagtggcgcccgacctcgtc
cgggtcgcggccgcgctcgtcctgcgtgagggccgcgaggtcgttgccgacaccctgcgc
ggcgagccctgcctgttcctgaagggactgcacggcgccgagcgcgccatcgccatgcgg
atggtcgagagggcgacgggagcgccgccctggccggagatcgatttcgccctcgctcgc
ccctgggtcgaggcgaagaccggcaagacgctctcggcctcgcaggccgaggcggtcggg
ctcgtgctgcgctcgaagctctgcgtgctcaccggcggtcccggcgtcggcaagacctcc
accctcgacgcgatcctgcgcatcctcacggccaagggcgtgcgcgtgctgctcgccgcg
cccaccggccgcgccgccaagcgcatggccgagcagaccgggctggaggcccgcaccctc
caccgcctgctggagatcgacccgcgcaacggcggcttccagcgcggggaggacaacccg
ctcgattgcgatctcctcgtcatcgacgagacctcgatggtcgacgtgccgctgatgcat
gccgtgctcaaggcggtgccggagagggccggcctgatcctcgtcggcgacgtcgatcag
ctgccctccgtcggccccgggcaggtgctcgccgacctgatcgcgtccggccgcgttccg
gtggcccgcctgaccgagatcttccgccaggcggcgcagagccggatcgtcgtcaatgcc
cacagcatcaacaccggccgcatgccggtcacggcgccgaagggggaggagagcgacttc
tacctcgtggagatcgaggatgccgaggcgggcgtggagacgctgatcgacctcgtgacc
cgccgcatcccgcgccgcttcggcctcgatccggcccgcgacatccaagtgctgacgccg
atgatccgcggctcgctcggcagccgcaacctcaaccacgccctccagcgcgtgttgaat
ccctcccccccggcgcaggtggagcgcttcggctggcgcttcgcccccggcgaccgagtg
atggagacccggaacgactacgaccgcgacgtgttcaacggcgatctcggcacggtgagc
gccatcgacgcggaggaggaggcgctcgtggtcgatttcgacggtcggccggtgatctac
ccgttcggcgaactcgacacgctggtgccggccttcgccacgacgatccacaaggcgcag
ggttcggaatacccggccgtggtgatcccggtggtcacgcagcaccgcacgatgctcgca
cgcaacctcctctataccggcgtgacccgcgggcgccgtctcgtcgtgctcgtgggtcag
cgccgggcggtcggcttggcgatccgcgagggcgcggcgcggcggcgctggaccaagctg
cgggaatggctcgagaccgcctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MPO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (38)   

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