KEGG T00760: Mpop

Methylobacterium populi: Mpop_3229

Entry

Mpop_3229 CDS T00760

Definition

exodeoxyribonuclease V

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

mpo Methylobacterium populi

Pathway

mpo03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:mpo03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 Viral_helicase1 AAA_11 AAA_19 PIF1 PhoH AAA Herpes_Helicase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3454960..3456873)

AA seq 637 aa
MLTPVGEALVRHLAQDAAFAGIGPVTAGRLWNRFGDDLPRVLSDGDADALASVVGEERAS
SLVIAWRERQALGDIVVWLGENGFDIRLAGRITALWGAEAARRLRARPYDLMAVAPWAAV
DAAACRIGVPRDAPERLVAAVESVLYERFEEHHTWIASGELLDEVGRRLDCDGDRAGEAV
HLALLEGAAFEAEGGYQAAGAHMMEGYVAGRLRAMTASAPVGDLVARPVTGPEVERWLRD
AEASAGPVLDPEQREAVRLGLQAALGLMVGGAGVGKTTALRAICGAAGSHGHVVHLVALA
GRAAVRMGEATAHPASTIAAFLGRIESGEVVLGPQTLVVVDEASMVDLPTFYRLLRRMPE
GSRLLLVGDDAQLPPIGFGLVFHELVDVPDIPKVTLVRVHRQAAATGIPLVAAAVRSGTL
PVMDKELTGPGFGVAFLDGSSDGQATLDDVVDAVATCGGWRDDLRILCPTKGGPVGTEAV
NACFHDLLTRGHDRMPGRGFAAGEPVMFLRNDYRLDLRNGSLGTVTGFDGQVLEVDFDGR
RHELSGRNLDDTALAYAVTVHKAQGSAFRRVVMPVTPTRLLDRSLVYTAITRAREQAVLV
GDRRAFARAVQAATSANRRFTGLKAAMRKQAVDEGAA

NT seq 1914 nt +upstreamnt +downstreamnt
atgctaacgcccgttggggaagccctcgttcgccatctcgcccaggacgccgctttcgct
ggcatcggtccggtcaccgccggccgcctctggaacaggttcggcgacgacctcccgcgc
gtgctgtccgatggggatgccgacgccttggcgagcgtcgtcggcgaggagcgcgcgtcc
agcctcgtcatcgcctggcgcgagcggcaggccctcggcgacatcgtcgtatggctcgga
gagaacggtttcgacatacggctggccgggcgcatcaccgccctgtggggtgccgaagcg
gcccgacgcctgcgcgcccggccgtatgacctcatggccgtggctccctgggccgcggtt
gatgccgccgcgtgccggattggcgtccctcgggatgcgccggagcgcctggtcgcggcc
gtcgagagcgtcctctacgaacgcttcgaggagcatcacacctggatcgcgagcggcgag
ctgctggatgaggtcgggcggaggctcgattgcgacggcgacagagctggcgaggcggtt
cacctggccctcctggagggggccgccttcgaggcagagggcgggtaccaggctgccggt
gcccacatgatggaggggtatgtcgccggacgcctccgcgcgatgacagcttcggcgccc
gtgggcgacctcgtcgcgcggccggtcaccggtcccgaggtcgagagatggctccgggac
gccgaggcttcagcgggccccgtcctcgatcccgaacagcgagaggccgtcaggctgggc
ctccaggccgccctcggcctcatggtgggcggggcaggggttggcaagaccacggcgttg
cgggcgatctgcggcgcggcagggtctcacgggcacgtggtccacctcgtcgccctggcc
ggccgtgccgcggtgcggatgggggaggcgaccgcacacccggcctcgaccatcgcggcc
ttcctcgggcgcatcgaatcgggcgaggtcgtgctgggtccccagaccctggtcgtcgtg
gacgaggcgtcgatggtcgacctgcccaccttctacaggcttctccggcgcatgcccgag
ggttcccgcctgctcttggtcggcgacgatgcccagttgccgcccatcggtttcgggctc
gttttccacgaactggtcgatgtgccggacatccctaaggtcaccctggtccgcgtgcat
cggcaagcggccgccaccggcatcccgctcgtcgccgcggccgtgcggtccgggacgctg
ccggtgatggacaaggagctgactggacccggcttcggcgtcgccttcctcgacggctcc
tccgacggccaggcgaccctcgacgatgttgtggatgccgtcgcgacctgcggggggtgg
cgggacgacctgcgcatcctctgcccgaccaagggcggccccgtcgggaccgaagcggtc
aatgcgtgtttccacgacctgcttacccgggggcacgaccgcatgccgggacgtggcttc
gccgccggtgagcccgtcatgttcctgcgcaacgattaccgcctcgatctccgcaacggg
tccctcgggaccgtgacgggtttcgacggtcaggtcctggaggtcgatttcgatggccgc
cgacacgagctctcgggccggaacctcgatgacacggcgcttgcctatgccgttaccgtc
cacaaggcgcagggatcggccttccgccgcgtcgtgatgcctgtgacaccgacgcgcctg
ctggaccgctcgctggtctatacggcaataacccgggctcgggagcaggccgtgctggtc
ggcgaccggcgggcgttcgcgagggcggttcaggcggcaacgagtgccaaccgcaggttc
acgggcctgaaggcggcgatgcggaagcaggcggtggacgagggggctgcgtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MPO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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