KEGG   Methylorubrum populi: Mpop_5310
Entry
Mpop_5310         CDS       T00760                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
mpo  Methylorubrum populi
Pathway
mpo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Mpop_5310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpo03400]
    Mpop_5310
Enzymes [BR:mpo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mpop_5310
DNA repair and recombination proteins [BR:mpo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Mpop_5310
    RecFOR pathway proteins
     Mpop_5310
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_22 AAA_3 AAA_14 nSTAND3 AAA_17 AAA_16 AAA_2 AAA_18 Sigma54_activat Rad17 ResIII TsaE AAA_33 RNA_helicase NTPase_1 DUF815 AAA_28 NB-ARC ABC_tran Sigma54_activ_2 NACHT AAA_7 IstB_IS21 AAA_19 AAA_24 Cytidylate_kin Parvo_NS1
Other DBs
NCBI-ProteinID: ACB83403
UniProt: B1ZAT0
Position
complement(5676436..5677602)
AA seq 388 aa
MPKHAAGVAFAAVVWARGMCKTLAKTPPRETPVSEDRPSKPGKTLLNPERRADDVDQSIR
PLSLAEFIGQRAARANMQIFIEAAKKTGQALDHVLFVGPPGLGKTTLAQIVARELGVNFR
STSGPVIAKAGDLAAQLTNLEERDVLFIDEIHRLNPAVEEILYPAMEDYQLDLIIGEGPA
ARSVKIELPKFTLVGATTRAGLLTTPLRDRFGIPIRLEFYEIDELELIVRRGARVLGLGM
SEEGANEIAKRARGTPRIAGRLLRRVRDFAIVEDAQTVSRAIADRALQMLDVDPVGLDVM
DRKYLTLIAASFGGGPVGIETIAAALSEPRDAIEDIIEPYLIQKGFVQRTPRGRVLTPHA
FRHMGFAEPRRDPGTQFGLFGASDDPDA
NT seq 1167 nt   +upstreamnt  +downstreamnt
gtgccgaagcacgccgccggggtcgctttcgccgcggtggtgtgggcgcgcgggatgtgc
aaaacgctggcgaagacgccgccccgcgagacccccgtgagcgaagacagaccctcgaag
ccgggcaagaccctgttgaatcccgagcgcagagcggacgacgtcgatcagtcgatccgt
cccttgagcctcgccgagttcatcgggcagcgggcggcgcgcgccaacatgcagatcttc
atcgaggcggccaaaaagaccggccaagccctcgaccacgtcctgttcgtcggcccaccc
ggcctgggcaagaccacgctggcgcagatcgtcgcccgcgaactcggggtgaactttcgc
tcgacctccggtccggtcatcgccaaggccggcgacctcgcagcgcagctcacgaacctg
gaagagcgcgacgtcctgttcatcgacgagatccaccgcctcaatccggcggtggaggaa
atcctctatccggcgatggaggattaccagctcgacctcatcatcggcgaaggcccggcc
gcccgctcggtgaagatcgagctgccgaaattcaccctcgtcggcgccaccacccgcgcc
ggtctgctcaccacgccgctgcgcgaccgcttcgggatcccgatccgcctcgaattctac
gagatcgacgaactcgaactcatcgtccgccgcggggcgcgggtgctcggcctcggcatg
tccgaggagggcgccaacgaaatcgccaaacgcgcccgcggcacgccgcgcatcgccggc
cgccttttgcgccgggtgcgcgacttcgccatcgtcgaggacgcgcagaccgtcagccgc
gccatcgccgaccgggccttgcagatgctcgacgtcgatcccgtcggcctcgacgtgatg
gaccgcaagtacctgaccctgatcgccgcctctttcggcggcggcccggtcggcatcgag
acgatcgccgcggcgctctccgagccgcgcgacgccatcgaggacatcatcgagccctac
ctgatccagaagggcttcgtgcagcgcacgccccgcgggcgggtgctgacgccccacgcc
ttccggcacatgggcttcgccgagccccggcgcgatccgggcacgcagttcggcctgttc
ggcgccagcgacgacccggatgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (34)   
   Pfam (34)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system