KEGG   Micromonas pusilla: MICPUCDRAFT_45209
Entry
MICPUCDRAFT_45209 CDS       T02696                                 
Symbol
JGI:MicpuC2_45209
Name
(RefSeq) uncharacterized protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
mpp  Micromonas pusilla
Pathway
mpp03022  Basal transcription factors
mpp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MICPUCDRAFT_45209 (JGI:MicpuC2_45209)
  09124 Replication and repair
   03420 Nucleotide excision repair
    MICPUCDRAFT_45209 (JGI:MicpuC2_45209)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpp03021]
    MICPUCDRAFT_45209 (JGI:MicpuC2_45209)
   03400 DNA repair and recombination proteins [BR:mpp03400]
    MICPUCDRAFT_45209 (JGI:MicpuC2_45209)
Enzymes [BR:mpp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     MICPUCDRAFT_45209 (JGI:MicpuC2_45209)
Transcription machinery [BR:mpp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     MICPUCDRAFT_45209 (JGI:MicpuC2_45209)
DNA repair and recombination proteins [BR:mpp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     MICPUCDRAFT_45209 (JGI:MicpuC2_45209)
SSDB
Motif
Pfam: DEAD_2 HBB Helicase_C_2 ResIII DEAD
Other DBs
NCBI-GeneID: 9680461
NCBI-ProteinID: XP_003055270
JGI: 45209
UniProt: C1MJ87
Position
Unknown
AA seq 741 aa
MIFNLEGLTVYFPYEYLYPEQYKYMQELKRGLDAKGHGCLEMPTGTGKTITCLALITSYQ
LAHPECGKLIYCTRTVPEMEKVLAELRVLQAYREKHVGEAAAMLALGLSSRKNMCVHPRV
AEEGSRESVDARCRQLTASWVREKHNSALASGEEPTTELCQFFEDYEREGPDAVLPPGVY
TLADLRQFGRTKGWCPYFTARHMIKCSNVIVYNYQYLLDPKVSSLVSRELEKECVVVFDE
AHNIDNVCIEALSVNLRQQTLDVAGRNITALSAKIERAKQTDERRLRAEYDALVNGLANQ
GVLPRGGGEDAIANPVIPADILREAVPGNIRRAEHFVAFMRRLVEYLKQRLKATQVEQET
PMAFLAHLSQTAAIDGKTLKFCHDRLTSLLKTLEIVDTEEFNAVSLVADFGTLVGTYEKG
FALILEPYDERYPNIPDPVLQLSCLDASLAIAPVFERFDNVFITSGTLSPIDLYPKLLSF
NPVACISLPMTLTRDCLCPIVITRGADQQAVSTKFDMRDDPGVIQNYGRILIDMAASVPD
GLVAFFVSYSYMEQIVSKWHETGVLQNVMQHKLVFIETQDVVETSLALDNYRRACNCGRG
AVFLSVARGKVAEGIDFDRHYGRAVIMYGVPYQYTLSRILRARLEYLRETFQIKEADFLA
FDAVRQAAQCVGRVIRSKADYGLMVFADKRYNSHDKRGKLPGWITTHLKEERLNLSTDMA
VHVARTFMREMAQPYDRGYNN
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgatcttcaacctcgagggcctgaccgtgtacttcccgtacgagtacctctacccggag
cagtacaagtacatgcaagagctcaagcgcgggctggacgcgaaagggcacggatgcttg
gagatgcccacgggcacggggaagacgatcacgtgcctcgcgctgatcacgtcctatcag
ctcgcgcacccggagtgcgggaagctcatctactgcacgcgcacggtgccggagatggag
aaagtcctcgcggagctgagggtgctgcaggcgtaccgagagaaacacgtcggcgaggcc
gcggcgatgttagcgttggggctgagctcgaggaaaaacatgtgcgtgcacccgagagtc
gcggaggagggctcgagggagtccgtcgacgcgcggtgccggcagctcaccgcgtcgtgg
gtccgcgagaaacataacagcgcgctcgcgagcggggaggagccgacgacggagctgtgc
cagttcttcgaggactacgagagggagggcccggacgcggtgcttcccccgggggtgtac
accctcgcggatctgcggcaattcggaagaacgaaaggctggtgcccgtacttcaccgcg
cggcacatgatcaagtgcagcaacgtcatcgtgtacaactatcagtacttgctcgatccc
aaggtgagcagcctggtgagcagggagctcgagaaggagtgcgtcgtggtgttcgacgag
gcgcacaacatcgacaacgtgtgcatcgaggcgctgtcggtgaacttgcggcagcagacg
ttggacgtcgcgggacggaacatcaccgcgctgtccgcgaagatcgagcgcgcgaagcag
acggacgagcgaaggctgcgcgcggagtacgacgcgctcgtgaacgggctggcgaatcaa
ggggtgttaccgcgagggggcggcgaggacgccatcgcgaatccggtgatccccgcggac
atcttacgcgaggcggtgccgggaaacattcgcagggcggagcacttcgtcgcgttcatg
cgacggctcgtggagtacctgaaacaacggcttaaagcgacgcaggtggagcaggagacg
ccgatggcgttcttggcgcacctgtcgcagacggcggcgatcgacggcaagacgttgaag
ttttgccacgaccgtctgacgtcgctcttgaagacgctcgagatcgtggacacggaggag
ttcaacgccgtgtcgctcgtcgcggactttggcacgctcgtggggacgtacgagaagggc
ttcgcgctcatcttggagccgtacgacgagcggtatccgaacattccggatccggtgctg
cagctgtcgtgcctcgacgcgtcgctcgccatcgcgcccgtctttgaacgcttcgacaac
gtgttcatcacctccgggacgctgtcccctatcgacttgtaccccaagcttctgtccttc
aacccggtcgcgtgcatatcgctgccgatgacgctgacccgggactgcctgtgtccgatc
gtgatcaccagaggcgcggaccagcaggcggtgagcaccaagtttgacatgcgcgacgat
ccgggggtgattcaaaactacgggcggattctcatcgacatggccgcgagcgtcccggac
ggcctcgtcgcgttcttcgtgtcgtactcgtacatggagcagatcgtgagcaagtggcac
gagactggggtgttacagaatgtcatgcagcacaagctcgtgttcatcgagacccaagac
gtcgtggagacgtctctggcgttggataactaccgacgcgcgtgtaactgcggccgcgga
gccgttttcttgtccgtcgcgcgcggcaaggtcgcggaaggcatcgatttcgacaggcac
tacggcagggcggtcatcatgtacggcgtgccgtaccagtacacgctctcgcgcatctta
cgcgcgcggttggagtacttgcgagagacgtttcaaatcaaagaggcggactttctcgcg
ttcgacgcggtgcgacaagccgcgcagtgcgtcggccgcgtcatccgctcgaaagcggac
tacggcctcatggtcttcgcggacaagcggtacaactcgcacgacaagcgcgggaagctc
ccggggtggatcacgacgcacttgaaagaggagcgtctgaacttgagcacggacatggcg
gtgcacgtggcgcgaacgttcatgcgcgagatggctcagccgtacgaccgcggctacaac
aactag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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