KEGG   Micromonas pusilla: MICPUCDRAFT_58339
Entry
MICPUCDRAFT_58339 CDS       T02696                                 
Symbol
JGI:MicpuC2_58339
Name
(RefSeq) uncharacterized protein
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
mpp  Micromonas pusilla
Pathway
mpp03030  DNA replication
mpp03410  Base excision repair
mpp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MICPUCDRAFT_58339 (JGI:MicpuC2_58339)
   03410 Base excision repair
    MICPUCDRAFT_58339 (JGI:MicpuC2_58339)
   03420 Nucleotide excision repair
    MICPUCDRAFT_58339 (JGI:MicpuC2_58339)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpp03032]
    MICPUCDRAFT_58339 (JGI:MicpuC2_58339)
   03400 DNA repair and recombination proteins [BR:mpp03400]
    MICPUCDRAFT_58339 (JGI:MicpuC2_58339)
Enzymes [BR:mpp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MICPUCDRAFT_58339 (JGI:MicpuC2_58339)
DNA replication proteins [BR:mpp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    MICPUCDRAFT_58339 (JGI:MicpuC2_58339)
DNA repair and recombination proteins [BR:mpp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      MICPUCDRAFT_58339 (JGI:MicpuC2_58339)
SSDB
Motif
Pfam: DNA_pol_E_B tRNA_anti-codon Dpoe2NT BOF DNA_pol_D_N
Other DBs
NCBI-GeneID: 9684420
NCBI-ProteinID: XP_003058981
JGI: 58339
UniProt: C1MS41
Position
Unknown
AA seq 627 aa
MSASHLQGVVNDEFRMSGLSLRRDAMAAVLTFLDRSDDANAALTDVLDALDTKSLSSSIV
GADVIADITSALDRKRGVFGGPSTPAGGGSPGDDDLNDDDANGGGGGRGASASARREDHL
AAMLDASDGITIVDAFDVPRFTYDTQRKVFHEDAAGPRARSVCATSADSKIELYRERFLL
LQQRLARHRMFTKPSFAAGARASERTYCEITPLTGLLGCAHQTRYVMGCLSQLEDDRFFL
EDLTGQIQVDVTNAATSSGLYTENCIVVAEGEVRKRDGVFEVRALGFPPAESREETRSAT
NHVDFFGAGRLSPSDVSRLTEDEAAASEDMFVVLADVWLDKEATFKRLRTVFEGFDSLET
IPGMFVFMGDFTSEPFGPTKYDYSGYAAGFDQLATLIEDFPRLRQEARWVFVPGPGDPGV
AAALPRPPLLPSLTGRLRDALPRVAFASNPARIRYKSQDLVFMREDLQSRMRRNCILPPT
ELDDVRGKDIRAKEKDIAAGGGGSAADAAFDAARDDEMDAETDADEGDDEPSEWERRPLF
RHLAATLVQQAHLAPLPLAQLPVYWEHDHAMRLYPAPHCLVLGDRTEQQALAKFEDTELV
NPGCFADDGSFAVYRPATREVEFSAVP
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgtccgcgtcgcacctccaaggcgtcgtgaacgatgagttccgaatgtccgggctctcg
ctgcgacgcgacgccatggccgccgtgctgaccttcctcgaccgaagcgacgacgcgaac
gcggcgctgacggacgtcctcgacgcgctggacaccaagtcgctgtcgtcgtcgatcgtc
ggcgcggacgtcatcgcggacatcacgtccgcgttggaccgcaagcgcggcgtcttcggc
ggcccgtccacgcccgcgggagggggctcgcccggcgacgacgatctgaacgacgacgac
gcgaacggcggaggaggaggacgcggcgcgagcgcgagcgcgaggagagaagaccacctc
gccgcgatgttggacgcgtccgacgggataacgatcgtggacgcgttcgacgtcccgagg
ttcacgtacgacacgcagaggaaggtgttccacgaggacgccgcggggccgcgcgcgaga
tccgtctgcgcgacgagcgcggattcgaagatcgagctctaccgcgagcgattcctcctc
cttcagcagcgactcgcgcggcatcggatgttcacgaagccgtcgttcgccgcgggcgcg
cgcgcgtcggagcggacgtactgcgagatcacgcctctgaccgggctgctcgggtgcgcg
caccagacgaggtacgtcatgggatgcctctcgcagctcgaggacgatcgattcttcctc
gaggacctcaccgggcagatccaagtggacgtgacgaacgcggcgacgagcagcgggttg
tacacggagaactgcatcgtcgtcgcggagggcgaggtgaggaagcgcgacggcgtgttc
gaggtgagggcgttggggttcccgcccgcggagtcgagagaggagacgcgctcggcgacc
aaccacgtcgactttttcggcgccggacgcctctccccgagcgacgtttcgcgtctcacg
gaagatgaagcggcggcgtcggaggacatgttcgtcgtcctcgcggacgtgtggctggac
aaggaggcgacgttcaagaggctgcggaccgtgttcgaagggttcgactcgctcgagacg
attcccgggatgtttgtcttcatgggagacttcacgtcggagccgttcggacccaccaag
tacgactacagcggctacgccgccgggttcgatcagctcgcgacgttgatcgaagacttc
ccgcgtttacgacaagaggcgcgatgggtcttcgtcccggggccgggcgacccgggcgtc
gccgcggcgctgccgcggccgccgctgttgccgagtctgacggggaggcttcgcgacgcg
ttgccgcgcgtcgcgttcgcgtccaacccggcgcggatccgatacaagagccaagacctg
gtgttcatgcgcgaagatttgcaatcgcggatgcgaaggaactgcatcttgcccccgacg
gagctggacgacgtccgagggaaggacatcagagcgaaggagaaggatatcgccgcggga
ggtggaggttccgccgcggacgccgcgttcgacgcggcgcgcgacgacgagatggacgcg
gagacggacgcggacgaaggcgacgacgagccgtccgagtgggagcgccggccgctcttc
cgccacctcgcggcgacgctcgtgcaacaagcgcacctcgcgccgctgccgctcgcgcag
ctgcccgtgtactgggagcacgaccacgcgatgcggctgtacccggcgccgcactgcctc
gtgttgggcgaccgcacggagcagcaggcgctcgcgaagttcgaggacacggagctcgtg
aacccggggtgcttcgcggacgacgggtcgttcgcggtgtaccggccggcgacgcgggag
gtggagttctccgcggtgccgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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