| Entry |
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| Definition |
ribonuclease E (EC:3.1.4.-)
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| Orthology |
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| Organism |
mpt Methylibium petroleiphilum
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| Pathway |
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| Class |
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH: mpt03018]
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
NCBI-GI: NCBI-GeneID: JGI: UniProt: |
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| Position |
complement(688624..691620)
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| AA seq |
998 aa  
MKRMLINATQSEERRLAIVDGQKLLDFETEIEGREQRKGNIYKAVVTRVEPSLEACFVDY
GEDRHGFLPFKEISKQFFKEGVTVRDAKIQDVISNGTELLVQVEKEERGNKGAALTTFVS
LAGRYLVLMPNNPRGGGVSRRIEGEDREELKENLDQLEYPKGMSLIARTAGIGRSAPELQ
WDLNYMLKLWSAIDGAAKAGKGAFLIYQESSLVIRAIRDYFHADIGEILIDTDDIYEQAQ
QFMNHVMPESASRVKRYKDDAPLFSRFQIEHQIETAFSRTVNLPSGGAIVIDHTEALVSV
DVNSARSTRGSDIEETATRTNLEAADEIARQMRLRDLGGLIVVDFIDMEESKNRREVETR
LRDALRTDRARVQFSSISKFGLLELSRQRLRPALSEGSHITCPRCNGTGHIRDTESSALQ
ILRIIQEESMKENTAAVHVQVPVEVTSFLLNEKRTEITKIELRQRTTVLLVPNKHLETPN
YKLERLRHDDPRLENLQASYTMIEEPDDEVGITRREKAKAKQEPVIKGVLPDLPAPVAAP
KPEPVAKAPVAAAPPVVAAPVPASRDAGGGGFFGWLKKLFGGDVPPAAAPAVSAPAAQPA
KPAREGGRDGQRDGGRGRRGGRDGQRGERTEARGERGERGEDRNRRGGGAGEQRDGRGRR
SERPEGAVAETAGLSADRPPRNEPRRGPRPESAPASAAEDLTLPLAAEGVAAADATENAE
GGEGARRRRRRGGRGRGERDEARSDAPEGAVEGAAVDAAPSTDEDSLPPRAEGEAAPDDE
TAGEGGEPRRRRRGGRGRRERGEGDNGAPVAAAPLSDVAGGDDAAASSSAADTVKPWWEA
TPTAEPTAAAEPAVAAPTPPQPADVALQALADVVSRPPVATPPASVPVAAPVVARAPAPA
PVAIEPVADAAPPAAAAALPPYALPIDDLAAVATSAGLQWVNSDADKVRAVQQAMADAPK
PVHVPREPKPVVAIDDGPLVLVETRKDLSQIKLPFEGR |
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| NT seq |
2997 nt  +upstreamnt +downstreamnt
atgaaacgcatgctgatcaatgccacgcaatcggaagaacggcgcctggcgatcgtcgac
gggcagaaactgctcgacttcgagaccgagatcgaggggcgcgaacagcgcaagggcaac
atctacaaggccgtcgtcacccgcgtcgagccgtcgctggaggcctgcttcgtcgactac
ggcgaggaccgccacggcttcctgccgttcaaggagatctccaagcagttcttcaaggaa
ggcgtgaccgtccgcgacgcgaagatccaggacgtgatctccaacggcaccgagctgctg
gtgcaggtcgagaaggaggagcgcggcaacaagggcgcggcgctgaccaccttcgtcagc
ctggccgggcgctacctggtgctgatgcccaacaacccgcgcggcggcggcgtgtcgcgc
cgcatcgagggcgaggaccgcgaggagctcaaggagaacctcgaccagctcgagtacccc
aagggcatgagcctgatcgcgcgcaccgccggcatcgggcgcagcgcccccgagctgcag
tgggacctgaactacatgctcaagctgtggagcgccatcgatggcgcggccaaggcgggc
aagggcgccttcctgatctaccaggagtcctcgctggtgatccgtgcgatccgggactac
ttccacgccgacatcggcgagatcctgatcgacaccgacgacatctacgagcaggcccag
cagttcatgaaccacgtgatgccggaatcggcctcgcgggtcaagcgctacaaggatgac
gcgccgctgttcagccgcttccagatcgagcaccagatcgagaccgcgttctcgcgcacg
gtgaacctgccctcgggcggcgcgatcgtgatcgaccacaccgaggcgctggtatcggtc
gacgtgaactcggcgcgctcgacgcgcggctccgacatcgaggagaccgcgacgcgcacc
aacctcgaggcggccgacgagatcgcgcgccagatgcggctgcgcgacctgggcggcctg
atcgtcgtcgacttcatcgacatggaggagagcaagaaccgccgcgaggtcgagacccgc
ctgcgcgacgcgctgcgcaccgaccgcgcgcgtgtgcagttcagctcgatcagcaagttc
ggcctgctcgaactgagccgtcagcgcctgcgcccggcgctcagcgaaggcagccacatc
acctgcccgcgctgcaacggcaccggccacatccgcgacaccgagtcttccgcgctgcag
atcctgcgcatcatccaggaagagtcgatgaaggagaacaccgccgccgtgcacgtgcag
gtgccggtggaggtcacgtccttcctgctcaacgagaagcgcaccgagatcaccaagatc
gagctgcgtcagcgcaccaccgtgctgctggtgcccaacaagcacctcgagacgccgaac
tacaagctcgagcgcctgcgtcacgacgacccccgtctggagaacctgcaggccagctac
acgatgatcgaggagccggacgacgaggtcggcatcacccggcgcgagaaggccaaggcc
aagcaggaaccggtgatcaaaggcgtgctgcctgatctgcccgccccggtggccgcgccg
aaaccggaaccggtggccaaggcgccggtggccgcagcgccgccggtcgtggcggcaccg
gtgcctgccagccgcgacgcgggcggcggtgggttcttcggctggttgaagaaactcttc
ggcggcgacgtgccgccggccgccgcacccgcggtcagcgcgcctgccgcacagccggcg
aagccggcccgtgaaggcggacgcgatggccagcgcgacgggggccgcggtcgccgcggc
ggacgcgatggccagcgcggcgaacgcaccgaagcccgtggcgaacgcggtgaacggggc
gaggaccgcaaccgccgtggcggtggtgcgggagaacaacgcgacggccgaggccgccgc
agcgagcgcccggaaggtgctgtcgctgagacggccggcctgagcgccgaccgcccgccg
cgcaatgagccgcgccgcggcccgcgtccggaatcggcccccgcatcggcggccgaggac
ctgacactgcctctggctgccgagggcgtggctgcagccgacgccacggaaaatgcggag
ggaggtgaaggcgcacgccgccgccgccgccgcggtggccgcggtcgcggtgagcgtgac
gaggcccgcagcgatgcgcccgaaggcgcggtcgaaggcgccgccgtcgacgctgcaccg
agcaccgacgaagacagcctgccgccgcgtgccgaaggcgaggccgcaccggacgacgag
accgccggcgaaggcggcgagccgcgccgccggcgccggggcggccgcggtcgccgcgag
cgcggcgagggcgacaacggcgcgccggtcgccgcagcgccgctgagcgatgtggccggt
ggcgacgacgctgcggcgtcatccagcgcggccgacaccgtcaagccctggtgggaagct
accccgaccgccgagcccaccgctgcggcagagccggccgtcgcggcgcccacgccgccg
cagcccgcggacgtcgcgttgcaggcgttggccgacgtggtgtccaggcctcccgtggcc
acgccgcccgcctcggtgccggtcgctgcaccggtggtggcgcgcgcaccggcacccgcg
ccggtcgcgatcgaaccggtcgccgatgctgcgccgcctgcggctgccgccgccttgccg
ccctacgcgctgccgatcgacgacctcgccgcggtggccaccagcgcaggcctgcagtgg
gtgaactccgacgcggacaaggttcgcgcggtgcagcaggcgatggccgatgcaccgaag
ccggtgcatgtgccgcgcgagccgaagccggtggttgccatcgacgacggcccgctggtg
ctggtggagacgcgcaaggacctgtcgcagatcaagctgccgttcgaaggccgctga |
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