KEGG T00470: Mpe

Methylibium petroleiphilum: Mpe_A1359

Entry

Mpe_A1359 CDS T00470

Definition

DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mpt Methylibium petroleiphilum

Pathway

mpt03410	Base excision repair
mpt03420	Nucleotide excision repair
mpt03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mpt03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mpt03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mpt03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M mRNA_cap_enzyme DUF3588

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1463330..1464202

AA seq 290 aa
MSRRDVVGRALALAAAAGVRVAGAAAVRRSGDGAAAPSMLLAREAAAGQSPVGYRVSEKL
DGVRAQWDGRELRFRGGGVVPAPSWFTAGLPAVALDGELWLGRGRFEALTAIVRDRQPDD
AGWRQVRYGVFELPGAPGPFTERAARMAQLVSQTGPGPLMAVEQWELLDAAALQDRLASV
VAQGGEGLMLHRADAPYVTGRSEVLLKLKPLQDSEAVVIGHVAGKGRFVGQLGALRVRTP
QGREFALGTGFSDAQRASPPPQGTVVTYTYRGTTARGLPRFASFLRMAGP

NT seq 873 nt +upstreamnt +downstreamnt
atgtcgaggcgtgatgtggtggggcgtgcgctggccttggccgcggccgctggggtccgg
gtcgccggtgccgcagcggtgcgacgatccggcgacggtgcggccgcgccgtcgatgctg
ctggcgcgtgaggccgcggccggccagtctccggtcggctaccgggtcagcgagaagctc
gacggcgtccgggcgcaatgggacggacgcgagctgcggtttcgtggtggcggcgtggtg
ccggcaccgagctggttcacggccggcttgccggccgtggcgctggacggcgagctgtgg
ctcggccgtggccgtttcgaggcgctcacggcgatcgtgcgggaccggcagcccgacgat
gccggatggcggcaggtgcgctacggtgtgttcgagctgccgggagcgcccggcccgttc
accgagcgggcagcgcggatggctcaactggtcagtcaaacggggcccgggccgctgatg
gcagtggagcaatgggaactgctcgatgccgcagccctgcaggaccgactggccagcgtg
gtggcgcagggcggcgaagggctgatgctgcaccgggccgacgccccctacgtcaccggc
cgcagcgaagtgctgctgaagctcaagccgctgcaggacagcgaggcggtcgtcatcggg
cacgtcgcggggaagggccgctttgtcgggcagttgggcgccttgcgcgtgcgcacgccg
cagggacgggagttcgcgctgggcacgggcttcagcgatgcacagcgggcttcaccgcct
ccgcagggcacggtggtcacctacacctaccgcggcaccacggcgcgcggcctgccgcgc
ttcgccagtttcctgcggatggccgggccttga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MPT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system