KEGG T00470: Mpe

Methylibium petroleiphilum: Mpe_A1518

Entry

Mpe_A1518 CDS T00470

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mpt Methylibium petroleiphilum

Pathway

mpt03410	Base excision repair
mpt03420	Nucleotide excision repair
mpt03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mpt03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mpt03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mpt03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DUF3048

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1636468..1638096)

AA seq 542 aa
MRDFARLYAALDATTSTHEKLEALTAYFRAAPARHAAWAAYFLAGGKPRQAVPTALLRQL
AAERAGLPPWLFDACYEAVGDLAETIALVLPPPVRDSALGLDDWMRERIGPLRGAPPEQV
RTALFDAWDELDTPGRFLLGKLIGGGFRVGVSRLLLTRALAAVAGLDAKLIAQRLMGWTD
KGAQPTADAYAALLAPEAATGDASPGGQPYPFFLAHPLQAEPQTLGALADWQAEWKYDGI
RAQLVRRGGQSWLWSRGEELITDRFPELAKLSLPDGAVIDGEIVVWQDSRPAPFAALQRR
IGRKTLGARLLQELPAVLIAYDLLEQEGVDRRDEPQHLRRMRLEQLISATADPALQLSPQ
VQAPDWAALAVLRDTARERGVEGLMLKAREARYGVGRTKDVGVWWKWKVDPYAVDAVLVY
AQAGHGRRASLYTDYTFAVWDAPPDGAPGERRLVPFAKAYSGLSDAEIARVDAVIRKTTI
EKFGPVRSVRPTLVFEIGFEGIALSTRHRAGVAVRFPRILRTRPDKPVEEADTLATLKGL
LT

NT seq 1629 nt +upstreamnt +downstreamnt
gtgcgtgacttcgcccggctctacgccgctctggatgcgaccacctcgacgcacgagaag
ctcgaggcgctgacggcctacttccgggccgctcccgcccgccatgccgcctgggcggcc
tacttcctggccggtggcaagccgcgacaggccgtgccgacggcgctgctgcgtcaactg
gccgccgagcgcgccggcctgccgccctggctgttcgacgcctgctacgaggcggtcggc
gatctggccgagacgatcgcgctcgtgctgccgccgccggtacgcgacagcgcgctcggc
ctcgatgactggatgcgcgagcgcatcggtcccttgcgcggtgcgccgcccgagcaggtg
cgcaccgcgctgttcgatgcgtgggacgaactcgacacccccggccgcttcctgctcggc
aagctgatcggcggcggctttcgcgtcggcgtctcgcggctgctgctcacgcgcgcgctg
gccgcggtggccgggctcgacgccaagctcatcgcccaacggctgatgggctggaccgac
aaaggcgcccagccgacggccgacgcctacgccgcgctgctggcgccggaggccgcaacc
ggcgacgcctcgcccggcggccagccctacccgttcttcctcgcgcatccgctgcaggcc
gagccgcagacgctcggcgcgctcgccgattggcaggccgaatggaagtacgacggcatc
cgcgcccagctcgtgcggcgcggcggacaatcctggctctggtcgcgcggcgaggagctg
atcaccgaccgtttccccgagctggcgaagctgtcgctgcccgacggcgcggtgatcgac
ggcgagatcgtcgtctggcaggacagccgacctgccccgttcgcagccctgcagcggcgc
atcggccgcaagaccctcggagcgcgcctgctgcaggagttgccggcggtgctgatcgcc
tacgacctgctggagcaggagggtgtcgaccggcgcgacgagccccagcacctgcggcgc
atgcgcctcgagcaactgatctccgcgaccgccgaccccgcgttgcagctctcgccccag
gtgcaggcccccgactgggctgcactggccgtgctgcgcgacaccgcccgtgagcgcggc
gtcgagggcctgatgctgaaggcccgcgaggcgcgctatggcgtcggtcgcaccaaggac
gtcggcgtgtggtggaagtggaaagtcgacccctatgccgtcgacgcggtgctcgtctac
gcccaggccggccacgggcggcgcgcctcgctctacaccgactacaccttcgcggtgtgg
gacgccccgccggacggtgcgcccggcgagcgccgcctggtgccgttcgccaaggcctac
tccggcctgagcgacgccgagatcgctcgcgtcgacgcggtgatccgcaagacgacgatc
gagaagttcgggccggtgcgcagcgtgcggccgacgctggtgttcgagatcggattcgag
ggcatcgctctctcgacgcgccacagggcgggcgtcgcggtgcgcttcccgcgcatcctt
cggacacgtcccgacaaaccggtcgaggaagccgacacgctcgccacgctgaagggcctg
ctcacatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MPT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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