KEGG T00470: Mpe

Methylibium petroleiphilum: Mpe_B0266

Entry

Mpe_B0266 CDS T00470

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mpt Methylibium petroleiphilum

Pathway

mpt03410	Base excision repair
mpt03420	Nucleotide excision repair
mpt03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mpt03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mpt03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mpt03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_OB_2 DUF3861 DNA_ligase_A_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

RPME01:220389..221756

AA seq 455 aa
MHSPEIFNLLEQIAAEKKSTGKLALLKAHAGDATLQRVLELALNPLKTYGVKSLPPRGGS
GSEPFGDWHWALIERLRTRELTGHAARDEIRRALGALDAGSAALLGRILRKDLRAGISDT
TVNKVFAGLIPEFPYMRCSLPKDVKLAEWPWARGVYSQIKADGTFANVSVEQDGQIFVTS
RQGSEYPLESFGALADHLAAALAPGFQYHGELLVQRPQGALWETLPREDGNGLLTSILKG
GELPADHRIIYQAWDMIPLSVVQPKGRYAVAYEDRFARLKSQIESSAQPDSQVSLIPTRI
VHSLEQAYAHYREQLAAGLEGTILKRPDAIWRDGDSKEQCKLKLEVVVELRVVGFNEGSG
KNVGALGSFQCVSECGRLRVDVSGRGDKMRAEVWANREDWLDAIISVKANDIMEPESADG
YFSLFLPIFQERRLDKKAADTFDRIREQFDEAVKV

NT seq 1368 nt +upstreamnt +downstreamnt
atgcattcccccgagatcttcaacctcctcgagcagattgctgcggagaaaaagtcgacc
ggcaagctggcgctgctgaaggcgcacgccggcgacgccacgctccagcgcgtcctggag
ctcgcgctgaacccgctgaagacctacggggtcaagtcgctgccgccacgcggcggatcc
ggctccgagccgttcggcgactggcactgggcgctgatcgagcgcctgcgcacgcgagag
ctgaccggccacgccgcgcgcgacgagatccggcgcgcgctgggcgcgctcgatgccggg
tctgccgccctgctgggccgcatcctgcgcaaggacctgcgcgctggcatcagcgacacc
accgtcaacaaggtgttcgcgggcctgatccccgagttcccgtacatgcggtgctcgctg
cccaaggatgtcaagctggccgagtggccctgggcgcgcggcgtctacagccagatcaag
gcggacggcacgttcgccaacgtcagcgtcgagcaggacgggcagatcttcgtcaccagc
cggcagggctcggagtatccgctggagtccttcggcgcgctggccgaccacctcgccgcg
gcgctggcgcccggcttccagtaccacggtgagctgctggtgcagcgtccgcagggtgct
ctctgggagaccctgccgcgcgaggacggcaacggcctgctgaccagcatcctcaagggc
ggcgagctgcccgcggaccaccgcatcatctaccaggcctgggacatgatcccgctgtcg
gtcgtgcagcccaagggccggtatgccgtcgcctacgaggatcgattcgcgcgcctgaag
agccagatcgagtcgtcggcccagccggactcccaggtctcgctgatccccacgcgcatc
gtgcactcgctcgagcaggcgtatgcgcactaccgcgagcagctggccgccggcctggaa
ggcacgatcctgaagcgtccggacgccatctggcgcgacggggactcgaaggagcagtgc
aagctgaagctcgaggtcgttgtcgagctgcgcgtggtcggcttcaacgagggttccggc
aagaacgtcggcgccctgggctcgttccagtgcgtgtccgagtgcggccgcctgcgcgtc
gacgtgagcggccgcggcgacaagatgcgcgccgaggtgtgggccaaccgcgaggactgg
ctcgacgccatcatctcggtgaaggcgaacgacatcatggagccggagtccgccgacggc
tacttctcgctcttcctgccgatcttccaggagcgccgtctggacaagaaggcggccgac
acgttcgaccgcatccgcgagcagttcgacgaggcggtcaaggtatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MPT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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