KEGG   Mycoplasmopsis pulmonis: MYPU_5460
Entry
MYPU_5460         CDS       T00055                                 
Symbol
MYPU_5460
Name
(GenBank) DNA-DIRECTED RNA POLYMERASE BETA CHAIN (TRANSCRIPTASE BETA CHAIN) (RNA POLYMERASE BETA SUBUNIT)
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mpu  Mycoplasmopsis pulmonis
Pathway
mpu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MYPU_5460 (MYPU_5460)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpu03021]
    MYPU_5460 (MYPU_5460)
   03400 DNA repair and recombination proteins [BR:mpu03400]
    MYPU_5460 (MYPU_5460)
Enzymes [BR:mpu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MYPU_5460 (MYPU_5460)
Transcription machinery [BR:mpu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MYPU_5460 (MYPU_5460)
DNA repair and recombination proteins [BR:mpu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MYPU_5460 (MYPU_5460)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RnfC_N
Other DBs
NCBI-ProteinID: CAC13719
UniProt: Q98Q23
Position
complement(674099..677749)
AA seq 1216 aa
MPQKINYELKNFGQYTKRRDYSKTRFSLPLTDVLAIQKESFDWFLNKAIEATLRKYYPIK
SSNNKVEIKYVLGSKRIEKPLVTEQKAVKEAKQKGISYSARLYVKLQKHITETGEISFDE
VILCDIPLMTSSGSFIINGFEKVIVSQLIRSPGAYFAQKTRDKQSDDLFNKVEVLPRIGS
WIEIKHKVTSNLDSVKIKIDKHKSFLLTTFLSSFGFTEESMYKLFGNSETLKNTLSKDKI
LGKNKDIVEIRKEAQENIFRIVRRGDRITKEASQNLISNLLFNEKRYNLSKTGRYMLNRK
LSLFDRIITTYLAQDIVLKNVDPTMEAKILYPKGTYITNDIAIEIQNAFKEGLIKNIDLK
DYGITSDVYGKLLDTNPKLKNRMNIIGIYIFKSKKAMEKDGEKHFVIGNDPTSVENHLLI
SDIVAIINYYFNLNENIGRDDDPDSLINKRIVSVGELLLNQLNIGLLKMEKNTREKMSSK
EISRITPKNITNNKMIQNQIKTFFNSSKLSQFMDQTNPLSEISTKRKITSLGPGGLNRDT
AQFEVRDVHATHYGRICPIETPEGPNIGLILNLATYAKVDEYGFLQTPYFKVTNGIVDFS
QPVYLTAHEEINRTFAQSSISIDENGKITDEQVIVKSNFDYNVVSPKEVDYIDVSSKQMT
SLAASSIPFLENNDANRALMGSNMQRQAVPLLFAEAPLVATGIEADIAKFSPNNLKSTVD
GEVVFVDGSQIKIKDSASEKGSIKTYQLKTFEKTNQGTVISQSPIVKMGDKVLKGDLISD
SSSFKDGEMALGKNVLVGFSTWNGYNYEDAIIVSERLVKDDVFTSIHIEEQTIQFRKSKA
GDDKLTADIPNASLKSRRHLDENGIVRIGSEVVTGDILVGRVSPKGDENISPAEKLLNGI
FNQKISNEKDTSLKVKNGHQGTVIDVEILSRENGNVLEEEIDMMIKVYVAQKRKIKVGDK
MAGRHGNKGVISRVLPVEDMPYLEDGTPLDIILNPQGVPSRMNIGQVLELHLGMAAKKLG
VKFVSPVFDGVKKADIMDALEEAKLPRTGKMKVFDPTTGEKIDNEISVGVMYMFKLSHMV
DDKMHSRSIGPYSLITQQPLGGKSQNGGQRFGEMETWALESYGAANILQEILTYKSDDIQ
GRNNLYSALTSGTKLPKPGVPESFSVLAYELRGLGIKLQIHEKEEEKQELPSQEYESLNL
DQELKTASENVSESEF
NT seq 3651 nt   +upstreamnt  +downstreamnt
atgccgcaaaaaattaattatgagctaaaaaattttggtcagtacacaaaaagaagagac
tattcaaaaactagattttctcttccattaactgatgttttggctatccaaaaagaatct
tttgattgattcttgaacaaagcaattgaagctactctaagaaaatattatccaattaaa
tcttcaaataacaaagttgagatcaagtatgttttaggttcaaaaagaattgaaaaacca
cttgtaactgagcaaaaagcagttaaagaagctaaacaaaaaggtatttcttattcagca
aggctttatgtaaaattgcaaaaacacataacagaaactggggagatttcttttgatgag
gtaattctttgtgatattccgctaatgacaagtagtggatcttttatcattaatggtttt
gaaaaagttattgtttcacaacttattagatcacctggagcttactttgctcaaaaaact
cgtgacaaacaatcagatgatttgttcaataaagttgaagttctaccaagaattggttca
tgaattgaaattaaacacaaagttacatcaaatttagatagtgtaaaaattaaaattgac
aagcacaaatcattcttgttaacaacttttttatcttcttttggttttactgaagaaagc
atgtacaaactttttggaaattcagaaactctaaaaaacactctttcaaaagataaaatt
ttaggtaaaaacaaagatattgttgaaattagaaaagaagctcaagaaaacatttttaga
atagttagaagaggagatcgtataactaaagaagcttcacaaaatttaatttcaaattta
ctttttaacgaaaaaagatataacctatcaaaaacaggtagatatatgcttaatcgtaaa
ttgagcttatttgatagaatcattaccacttatctagcccaagatatagtgctaaaaaat
gttgatcctacaatggaagctaaaattttatatccaaaaggtacctatattacaaatgat
attgctattgaaattcaaaatgcttttaaagaaggtctaattaaaaatattgatctaaaa
gactatggaattacaagtgatgtttatggaaaattacttgatacaaatcctaagttaaaa
aacagaatgaatatcattggtatttatatttttaaatctaaaaaagctatggaaaaagat
ggagaaaaacactttgtaattggtaatgatcctactagtgttgaaaaccatttattaatt
tcagatattgttgcaattattaactattactttaatttaaatgaaaacattggtagagat
gatgatcctgattcacttattaataaaagaatagttagtgttggagaattgttattaaac
caattaaatattggtcttttaaaaatggaaaaaaatactagagaaaaaatgtcttctaaa
gaaatctctagaatcactccaaaaaacattaccaataacaaaatgattcaaaaccaaatt
aaaaccttctttaactcatcaaagctttctcagtttatggatcaaacaaatcctctttca
gaaatttctacaaagagaaaaattacttctctagggcctggtggtcttaatagagataca
gctcaatttgaagttcgtgacgttcatgcaactcactatggaagaatttgcccaattgaa
acccctgaaggaccaaacatcgggctaattcttaacttagcaacttatgcaaaagttgat
gaatatggatttttacaaactccatatttcaaagtaactaatggaatagttgatttttct
caacctgtttatttaacagctcatgaagaaatcaatagaacttttgctcaatcttcaatt
tcaattgatgaaaatggaaaaattactgatgaacaagttattgttaagtctaattttgac
tataacgttgtttcaccaaaagaagttgactacattgacgtttcatcaaaacaaatgacc
tcactagctgcttcttcaattccttttctagaaaacaatgatgccaaccgtgcacttatg
ggttcaaacatgcaacgtcaagctgttcctttactttttgcagaagctcctcttgttgca
acaggaattgaagctgacattgctaagttttcaccaaacaatttaaaatcaacggttgat
ggagaagttgtttttgtcgatggatctcaaataaaaattaaagatagtgcctctgaaaaa
ggaagtataaaaacttatcaactaaaaacatttgaaaaaacaaatcaaggaacagttatt
tctcaaagtcctattgttaaaatgggagataaagttttaaaaggtgatttaatttctgat
tcatcaagctttaaagatggtgaaatggctcttggtaaaaatgtgcttgttggtttttca
acttgaaatggatataactatgaagatgctattatagttagtgaaagactagttaaagat
gatgtctttacttcaattcacattgaagagcaaactattcaatttagaaaatcaaaagct
ggagatgataaattaacagctgatattcctaatgcttcattaaaatcaagaagacacctt
gatgaaaatggtattgtaagaataggttctgaagtagttacaggtgatattttagttgga
agggtctctcctaaaggagatgaaaacatctcacctgctgaaaaattactaaatggaatt
tttaaccaaaaaatttctaatgaaaaagacacatcattaaaagttaaaaacggacaccaa
ggaacagttattgatgttgaaattctaagtagagaaaatggaaatgttcttgaagaagaa
attgacatgatgattaaagtttatgtagctcaaaaaagaaaaatcaaagttggagacaaa
atggctggtcgccatggaaacaaaggggttatttctagagtgcttcctgttgaagatatg
ccttatttagaagatggaactcctcttgatattattttaaatcctcaaggggttccttca
aggatgaacattggacaagttcttgagcttcaccttggaatggctgctaaaaaacttggt
gttaaatttgtctcaccagtttttgatggtgttaaaaaagctgatattatggatgctctt
gaagaggctaaattgcctagaacagggaaaatgaaagtttttgatcctacaactggagaa
aaaattgacaatgaaatttctgttggtgttatgtatatgttcaaactttctcacatggtt
gatgacaagatgcactcaagaagtattggaccttattctcttattactcaacaacctctt
ggaggaaaaagtcaaaacggaggacaaagatttggggagatggaaacttgagctcttgag
tcttatggagctgccaacattctacaagaaatactaacttataaatcagatgatattcaa
ggaagaaataatctttattcagctctaacaagtggaacaaaacttcctaaaccgggagtt
cctgagtcatttagtgttttagcctatgaattaagagggctaggaatcaaacttcaaatt
catgaaaaagaagaagaaaaacaagaactaccaagccaagaatatgaaagtttaaatctt
gatcaagagctaaaaacagcttctgaaaatgttagtgaaagtgagttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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