KEGG M.pulmonis: MYPU

Mycoplasma pulmonis: MYPU_5460

Entry

MYPU_5460 CDS M.pulmonis

Gene name rpoB

Definition DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)

Orthology K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]

Pathway mpu00230 Purine metabolism
mpu00240 Pyrimidine metabolism
mpu01100 Metabolic pathways
mpu03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:mpu00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:mpu00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:mpu03020]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1
RNA_pol_Rpb2_45 RNA_pol_Rpb2_2
PROSITE: RNA_POL_BETA

Other DBs NCBI-GI: 15829017
NCBI-GeneID: 911205
MypuList: MYPU_5460
UniProt: Q98Q23

Position complement(674099..677749)

AA seq 1216 aa
MPQKINYELKNFGQYTKRRDYSKTRFSLPLTDVLAIQKESFDWFLNKAIEATLRKYYPIK
SSNNKVEIKYVLGSKRIEKPLVTEQKAVKEAKQKGISYSARLYVKLQKHITETGEISFDE
VILCDIPLMTSSGSFIINGFEKVIVSQLIRSPGAYFAQKTRDKQSDDLFNKVEVLPRIGS
WIEIKHKVTSNLDSVKIKIDKHKSFLLTTFLSSFGFTEESMYKLFGNSETLKNTLSKDKI
LGKNKDIVEIRKEAQENIFRIVRRGDRITKEASQNLISNLLFNEKRYNLSKTGRYMLNRK
LSLFDRIITTYLAQDIVLKNVDPTMEAKILYPKGTYITNDIAIEIQNAFKEGLIKNIDLK
DYGITSDVYGKLLDTNPKLKNRMNIIGIYIFKSKKAMEKDGEKHFVIGNDPTSVENHLLI
SDIVAIINYYFNLNENIGRDDDPDSLINKRIVSVGELLLNQLNIGLLKMEKNTREKMSSK
EISRITPKNITNNKMIQNQIKTFFNSSKLSQFMDQTNPLSEISTKRKITSLGPGGLNRDT
AQFEVRDVHATHYGRICPIETPEGPNIGLILNLATYAKVDEYGFLQTPYFKVTNGIVDFS
QPVYLTAHEEINRTFAQSSISIDENGKITDEQVIVKSNFDYNVVSPKEVDYIDVSSKQMT
SLAASSIPFLENNDANRALMGSNMQRQAVPLLFAEAPLVATGIEADIAKFSPNNLKSTVD
GEVVFVDGSQIKIKDSASEKGSIKTYQLKTFEKTNQGTVISQSPIVKMGDKVLKGDLISD
SSSFKDGEMALGKNVLVGFSTWNGYNYEDAIIVSERLVKDDVFTSIHIEEQTIQFRKSKA
GDDKLTADIPNASLKSRRHLDENGIVRIGSEVVTGDILVGRVSPKGDENISPAEKLLNGI
FNQKISNEKDTSLKVKNGHQGTVIDVEILSRENGNVLEEEIDMMIKVYVAQKRKIKVGDK
MAGRHGNKGVISRVLPVEDMPYLEDGTPLDIILNPQGVPSRMNIGQVLELHLGMAAKKLG
VKFVSPVFDGVKKADIMDALEEAKLPRTGKMKVFDPTTGEKIDNEISVGVMYMFKLSHMV
DDKMHSRSIGPYSLITQQPLGGKSQNGGQRFGEMETWALESYGAANILQEILTYKSDDIQ
GRNNLYSALTSGTKLPKPGVPESFSVLAYELRGLGIKLQIHEKEEEKQELPSQEYESLNL
DQELKTASENVSESEF

NT seq 3651 nt +upstreamnt +downstreamnt
atgccgcaaaaaattaattatgagctaaaaaattttggtcagtacacaaaaagaagagac
tattcaaaaactagattttctcttccattaactgatgttttggctatccaaaaagaatct
tttgattgattcttgaacaaagcaattgaagctactctaagaaaatattatccaattaaa
tcttcaaataacaaagttgagatcaagtatgttttaggttcaaaaagaattgaaaaacca
cttgtaactgagcaaaaagcagttaaagaagctaaacaaaaaggtatttcttattcagca
aggctttatgtaaaattgcaaaaacacataacagaaactggggagatttcttttgatgag
gtaattctttgtgatattccgctaatgacaagtagtggatcttttatcattaatggtttt
gaaaaagttattgtttcacaacttattagatcacctggagcttactttgctcaaaaaact
cgtgacaaacaatcagatgatttgttcaataaagttgaagttctaccaagaattggttca
tgaattgaaattaaacacaaagttacatcaaatttagatagtgtaaaaattaaaattgac
aagcacaaatcattcttgttaacaacttttttatcttcttttggttttactgaagaaagc
atgtacaaactttttggaaattcagaaactctaaaaaacactctttcaaaagataaaatt
ttaggtaaaaacaaagatattgttgaaattagaaaagaagctcaagaaaacatttttaga
atagttagaagaggagatcgtataactaaagaagcttcacaaaatttaatttcaaattta
ctttttaacgaaaaaagatataacctatcaaaaacaggtagatatatgcttaatcgtaaa
ttgagcttatttgatagaatcattaccacttatctagcccaagatatagtgctaaaaaat
gttgatcctacaatggaagctaaaattttatatccaaaaggtacctatattacaaatgat
attgctattgaaattcaaaatgcttttaaagaaggtctaattaaaaatattgatctaaaa
gactatggaattacaagtgatgtttatggaaaattacttgatacaaatcctaagttaaaa
aacagaatgaatatcattggtatttatatttttaaatctaaaaaagctatggaaaaagat
ggagaaaaacactttgtaattggtaatgatcctactagtgttgaaaaccatttattaatt
tcagatattgttgcaattattaactattactttaatttaaatgaaaacattggtagagat
gatgatcctgattcacttattaataaaagaatagttagtgttggagaattgttattaaac
caattaaatattggtcttttaaaaatggaaaaaaatactagagaaaaaatgtcttctaaa
gaaatctctagaatcactccaaaaaacattaccaataacaaaatgattcaaaaccaaatt
aaaaccttctttaactcatcaaagctttctcagtttatggatcaaacaaatcctctttca
gaaatttctacaaagagaaaaattacttctctagggcctggtggtcttaatagagataca
gctcaatttgaagttcgtgacgttcatgcaactcactatggaagaatttgcccaattgaa
acccctgaaggaccaaacatcgggctaattcttaacttagcaacttatgcaaaagttgat
gaatatggatttttacaaactccatatttcaaagtaactaatggaatagttgatttttct
caacctgtttatttaacagctcatgaagaaatcaatagaacttttgctcaatcttcaatt
tcaattgatgaaaatggaaaaattactgatgaacaagttattgttaagtctaattttgac
tataacgttgtttcaccaaaagaagttgactacattgacgtttcatcaaaacaaatgacc
tcactagctgcttcttcaattccttttctagaaaacaatgatgccaaccgtgcacttatg
ggttcaaacatgcaacgtcaagctgttcctttactttttgcagaagctcctcttgttgca
acaggaattgaagctgacattgctaagttttcaccaaacaatttaaaatcaacggttgat
ggagaagttgtttttgtcgatggatctcaaataaaaattaaagatagtgcctctgaaaaa
ggaagtataaaaacttatcaactaaaaacatttgaaaaaacaaatcaaggaacagttatt
tctcaaagtcctattgttaaaatgggagataaagttttaaaaggtgatttaatttctgat
tcatcaagctttaaagatggtgaaatggctcttggtaaaaatgtgcttgttggtttttca
acttgaaatggatataactatgaagatgctattatagttagtgaaagactagttaaagat
gatgtctttacttcaattcacattgaagagcaaactattcaatttagaaaatcaaaagct
ggagatgataaattaacagctgatattcctaatgcttcattaaaatcaagaagacacctt
gatgaaaatggtattgtaagaataggttctgaagtagttacaggtgatattttagttgga
agggtctctcctaaaggagatgaaaacatctcacctgctgaaaaattactaaatggaatt
tttaaccaaaaaatttctaatgaaaaagacacatcattaaaagttaaaaacggacaccaa
ggaacagttattgatgttgaaattctaagtagagaaaatggaaatgttcttgaagaagaa
attgacatgatgattaaagtttatgtagctcaaaaaagaaaaatcaaagttggagacaaa
atggctggtcgccatggaaacaaaggggttatttctagagtgcttcctgttgaagatatg
ccttatttagaagatggaactcctcttgatattattttaaatcctcaaggggttccttca
aggatgaacattggacaagttcttgagcttcaccttggaatggctgctaaaaaacttggt
gttaaatttgtctcaccagtttttgatggtgttaaaaaagctgatattatggatgctctt
gaagaggctaaattgcctagaacagggaaaatgaaagtttttgatcctacaactggagaa
aaaattgacaatgaaatttctgttggtgttatgtatatgttcaaactttctcacatggtt
gatgacaagatgcactcaagaagtattggaccttattctcttattactcaacaacctctt
ggaggaaaaagtcaaaacggaggacaaagatttggggagatggaaacttgagctcttgag
tcttatggagctgccaacattctacaagaaatactaacttataaatcagatgatattcaa
ggaagaaataatctttattcagctctaacaagtggaacaaaacttcctaaaccgggagtt
cctgagtcatttagtgttttagcctatgaattaagagggctaggaatcaaacttcaaatt
catgaaaaagaagaagaaaaacaagaactaccaagccaagaatatgaaagtttaaatctt
gatcaagagctaaaaacagcttctgaaaatgttagtgaaagtgagttttaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   MYPULIST (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (6)   
   PROSITE (1)   
All databases (22)

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