KEGG T00674: Mrad2831

Methylobacterium radiotolerans: Mrad2831_3691

Entry

Mrad2831_3691 CDS T00674

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mrd Methylobacterium radiotolerans

Pathway

mrd03410	Base excision repair
mrd03420	Nucleotide excision repair
mrd03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mrd03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mrd03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mrd03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3929425..3931143)

AA seq 572 aa
MNEFAHLLDRLAYEPRRNAKLRMLQDYFARTPDPERGYALGAMTGTLSFREAKPALIRGL
VEERIDPVLFRLSHNYVGDLAETTALIWPGPTEAPREPGPGHNNPPPHVPTLAEVVETLA
TIPKRELPRHLADWLDALDETGRWALLKLVTGNLRVGVSARLAKTAVGALGGHDADAVEE
VWHGLTPPFETLFAWVEGRAERPETLNPAPFRPPMLSHPIEEEADLEKLEAEAFSAEWKW
DGIRVQLVGGLDRAGQQVGKVYSRTGEDITGAFPDLAEAITFAGALDGELLILRERRVQS
FNVLQQRLNRKAVTGKLLEEFPAHVRAYDLLTLEGDDLRGEPFATRRQKLEALVTRLDHA
RIDISPLVPFADWEALAAARADPASVGAGADADAIEGVMLKRLNSPYLPGRPKGPWWKWK
REPHIVDAVMMYAQRGHGKRSSFYSDYTFGVWREAPEGGDELVPVGKAYHGFTDAELAKL
DRYVRNNTTKRFGPVREVAHGREAGLVLEIAFEGVQRSTRHKSGVAMRFPRVSRIRWDKP
PAEADRIDVLERILARGEREIAPGATLMEKTA

NT seq 1719 nt +upstreamnt +downstreamnt
gtgaacgagttcgcccatctcctcgaccgcctcgcctacgagccgcgccgcaacgcgaag
ctgcgcatgctccaggactacttcgcgcgcacgcccgaccccgagcgcggctacgcgctg
ggcgccatgaccggcacgctgagcttccgcgaggccaagccggccctgatccgcgggctg
gtggaggagcggatcgacccggtgctgttccggctctcgcacaactacgtgggcgacctc
gcggagacgacggcgctgatctggccgggaccgacggaggcgccgcgggagccgggcccc
ggccacaacaatccgccgccccacgtcccgaccctggccgaggtcgtggagaccctcgcg
accatccccaagcgcgagctgccccgccatctcgcggactggctcgacgccctcgacgag
accgggcgctgggcgctcctgaagctcgtcaccggcaacctgcgggtcggcgtgtcggcg
cgactcgccaagacggcggtcggcgcgctgggcggccacgacgccgacgccgtcgaggag
gtctggcacggcctgaccccgcccttcgagactctgttcgcctgggtcgagggccgggcc
gagcggcccgagaccctgaaccccgcgccgttccggccgccgatgctgtcgcacccgatc
gaggaggaggccgacctcgagaagctggaggccgaggccttctcggccgagtggaagtgg
gacggcatccgtgtccagctcgtcggcggtctcgaccgggccggccagcaggtcgggaag
gtctattcccgcaccggcgaggacatcaccggggcgttcccggacctcgccgaggccatc
accttcgcgggcgccctcgacggcgagctgctgatcctccgcgagcggcgggtgcagagc
ttcaacgtgctgcagcagcgcctgaaccggaaggccgtgacgggcaagctcctggaggaa
ttcccggcccacgtgcgggcctacgacctcctcaccctggagggcgacgatctgcgcggg
gagccgttcgcaacacggcggcagaagctggaggcgctggtcacgcgcctcgaccacgcg
cggatcgacatctcgccgctcgtgcccttcgcggattgggaggccctggcggccgcccgg
gcggatccggcctcggtgggcgccggcgcggatgccgacgccatcgagggcgtgatgctc
aagcgcctcaacagcccctacctgccgggacgccccaaggggccgtggtggaagtggaag
cgcgagccgcacatcgtcgacgccgtgatgatgtatgcccagcgcgggcacgggaagcgc
tcgtccttctactcggactacacgttcggggtctggcgggaggcgcccgagggcggcgac
gagctggtgccggtgggcaaggcctatcacggcttcaccgacgccgagctcgccaagctc
gaccgctacgtccgcaacaacaccaccaagcgcttcggcccggtgcgcgaggtcgcccac
ggccgcgaggccgggctcgtcctcgagatcgccttcgagggcgtgcagcgctcgacccgg
cacaagtcgggcgtggccatgcgcttcccccgggtcagccgcatccgctgggacaagccg
cccgcggaggccgaccggatcgacgtgctcgaacggatcctcgcccggggcgagcgcgag
atcgcgccgggcgcgacgctgatggagaagaccgcatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MRD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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