KEGG   Melioribacter roseus: MROS_0012
Entry
MROS_0012         CDS       T02176                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mro  Melioribacter roseus
Pathway
mro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MROS_0012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mro03021]
    MROS_0012
   03019 Messenger RNA biogenesis [BR:mro03019]
    MROS_0012
Transcription machinery [BR:mro03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MROS_0012
Messenger RNA biogenesis [BR:mro03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MROS_0012
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB Spore_III_AA AAA PK_C AAA_25 AAA_22
Other DBs
NCBI-ProteinID: AFN73256
UniProt: I6ZZV5
Position
complement(11489..12736)
AA seq 415 aa
MDISELQSKKIVDLYKIAKEYGLTGYSDLRKQELIFKILEAQSQKDGLTFSKGVLEVLPD
GYGFLRSADYNYLPSPDDIYVSPSQIKRFSLRTGDFVSGQVRPPKEGERFFALLRVEAVN
GKNPEAIRERTLFDNLTPIYPTKRLKLESAPGEYSMRIVDLIAPIGKGQRGLIVSPPKAG
KTILLQKIANSITRNHPEVKIIMLLIDERPEEVTDMQRSVQAEVISSTFDEPAERHVQVA
NMVIEKAKRMVEAGDDVVILLDSITRLARAHNTVIPHSGRILSGGVDANALHKPKRFFGS
ARNTEDGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMELVLDRTLADKRIFPAIDINKS
GTRKEELLMTEEELNKVWILRKLLSDFDPTEAMEFLMDKMKGTRNNKEFLASMNS
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacatatcagaacttcaatccaaaaaaatcgttgacctctataaaatagcaaaggaa
tacggacttaccggttacagcgatttaagaaaacaggaattaattttcaaaattctcgaa
gcccaatctcaaaaagacggattaactttttccaagggcgtactcgaagtactgcccgac
ggttacggattcttgcgttcggcggattataactacttgccttctccggacgatatttat
gtatcgccttctcaaattaagagattcagtttgagaacgggagattttgtaagcggtcag
gtgagacctcccaaagaaggcgaacgattctttgctcttttaagagtcgaagccgtcaac
ggtaaaaatcccgaagctatcagagaacgtacgctcttcgataatcttactcccatttat
cctaccaagagattaaagctcgaatcggctccgggcgaatattcgatgagaattgtcgac
ctgatagctcccattggaaagggacagagaggattgattgtatctccgccgaaagccggt
aaaacaatcctgctccaaaaaattgcaaactcgattacgagaaatcatcccgaagtaaaa
ataattatgcttttgattgacgaacgcccggaagaagttaccgacatgcaacgttccgtg
caggcggaagttatcagttcgactttcgacgaacccgcagaacgtcacgttcaggtggcc
aacatggtaattgaaaaagccaagagaatggtcgaagccggagacgacgttgttatattg
ctcgacagtattactcgtctggctcgcgctcacaatactgttattcctcacagcggaagg
attttgtcgggcggcgtcgacgcaaatgctcttcataaaccgaaaagatttttcggatct
gcccgaaataccgaagacggaggcagccttactataatcgcaacggcgctgatcgacacc
ggaagcagaatggacgaagttattttcgaagaattcaaaggcaccggtaatatggaattg
gttctcgaccgcacattagccgacaagagaatattccccgctattgatattaataaatcc
ggcacgcgtaaagaagaattgcttatgaccgaagaggaactcaacaaggtttggatactt
cgcaaacttctttcggatttcgatcctacggaggcaatggaattcctgatggataaaatg
aaaggaacccgaaataataaagaattcttagccagtatgaacagttaa

DBGET integrated database retrieval system