KEGG   Mycobacterium smegmatis JS623: Mycsm_06981Help
Entry
Mycsm_06981       CDS       T02423                                 
Definition
ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
msa  Mycobacterium smegmatis JS623
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:msa03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:msa03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:msa03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:msa03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
pMYCSM02:67492..68517
Genome map
AA seq 341 aa AA seqDB search
MAAYRRVVAVHAAGARHGSPEPMLATLRPVPASGDGVAVEWKYDGQRTAVVVDPTGTWIV
SRNGVDVSRTFPELAAIGDEFGGRRVILDGEIVAVDAQGRPSFTRLQRRWPQHRRPTPTL
LREVPVRVLAFDIVALGNRSLTGLPYCERRDILAELTDGLTSPVLTVPQSFSDVSPADML
QIAGQHGMEGVVVKRVDSPYVSGRTTLWTKHPVRSTAQLLIVAFWHAGGPGGARSVGSVL
LAGHNAAGDLVVVGQVGTGFSASTRRHLFELLDPIRRTDPPVVSAPEVPGAVWVQAETVG
EVAYREYVAGRWLRHTSWKGLRDAVDPATVAVPPVTAPLDP
NT seq 1026 nt NT seq  +upstreamnt  +downstreamnt
atggcggcgtaccgtcgtgtcgtggccgttcatgccgccggggcgcgccacgggtcgcca
gaacccatgctggccacgttgcggcctgtgccggccagcggcgacggcgtagctgtggag
tggaaatatgacggccagcgcacggcggtggttgtcgaccccacgggcacctggatcgtg
tcgcgtaacggcgtcgacgtgtcgcgcacgttccctgagctggcggcgataggagacgag
ttcggtgggcgccgcgtcatcctcgacggggagatcgttgccgtcgatgcgcagggccgg
ccgtcgttcacccggctgcagcgtcgatggccgcagcaccgccgcccgaccccgaccctg
ctgcgcgaagttcccgttcgcgtgctcgccttcgacatcgtcgccctcggcaaccgatcc
ttgaccggcctgccctattgcgagcgacgcgacatcctcgccgagttgaccgacggtctc
acgtcgcctgttctgaccgttccgcagtctttctcggacgtgtcgccggcagacatgctg
cagatagcgggccagcacggcatggagggtgtcgtcgtcaaacgcgttgactcgccgtat
gtttcgggtcgtacgacgttgtggaccaagcacccggtgcggtcgaccgcgcagctgctc
atcgtcgcgttctggcatgcgggcgggcccggcggcgcccgcagcgtgggctctgtgctc
ttggctggtcacaacgctgccggggacctggtggtagtcggccaggtgggcaccgggttc
agcgcgtcgacgcgtcggcacctgttcgagctgctcgacccgatacgccgcacggatccg
ccggtcgtatccgcgccggaggtcccgggcgctgtgtgggtccaggccgaaaccgtcggg
gaggtcgcctaccgcgagtatgtcgctgggcggtggctgcgccacacgagctggaagggt
ctgagggacgccgtcgacccggcgacggttgccgtaccacctgtaaccgcgcccctcgat
ccgtga
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