KEGG T03433: LJ00

Mycolicibacterium smegmatis MC2 155: LJ00_13540

Entry

LJ00_13540        CDS       T03433

Name

(GenBank) recombinase RecA

K03553

recombination protein RecA

Organism

msb Mycolicibacterium smegmatis MC2 155

Pathway

msb03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:msb00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LJ00_13540
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msb03400]
    LJ00_13540
DNA repair and recombination proteins [BR:msb03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LJ00_13540
    RecFOR pathway proteins
     LJ00_13540
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    LJ00_13540

SSDB

Motif

Pfam:

RecA RecA_C ATPase Rad51 ATPase_2 AAA_24 AAA_25 AAA_16 CobU AAA

Other DBs

NCBI-ProteinID:

AIU07891

Position

2792398..2793447

AA seq 349 aa
MAQQAPDREKALELAMAQIDKNFGKGSVMRLGEEVRQPISVIPTGSISLDVALGIGGLPR
GRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQ
PDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKM
TGALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDAV
GNRTRVKVVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQL
GQGKENARKFLLENTDVANEIEKKIKEKLGIGAVVTAEADDVLPAPVDF

NT seq 1050 nt +upstreamnt +downstreamnt
atggcgcagcaggccccagatcgcgaaaaggccctcgaactggcgatggcccagatcgac
aagaatttcggcaaaggctcggtgatgcgcctcggcgaagaggtgcgccagccgatctcg
gtgatccccaccggctccatctcgctggatgtggcgctcggcatcggcggcctgccgcgg
ggccgcgtcatcgagatctacggcccggagtcctcgggtaagaccaccgtggccctgcat
gccgtcgccaacgcgcaggccgcgggcggtatcgcggcgttcatcgacgccgagcacgcg
ctggatcccgagtacgccaagaagctgggtgtggacaccgactcgctgctggtgtcgcag
cccgacaccggtgagcaggcgctggagatcgccgacatgctggtgcggtccggcgcgctg
gacatcatcgtcatcgactcggtcgccgccctggtgccgcgcgccgagatcgagggcgag
atgggtgacagccacgtcggcctgcaggcccgcctgatgagccaggcgctgcgcaagatg
accggcgcgttgaacaactcgggcaccaccgcgatcttcatcaaccagctccgcgagaag
atcggtgtgatgttcggctcgcccgagaccaccacgggcggtaaggcactgaagttctac
gcctcggtccgcctcgacgtgcgccgtatcgagacgctcaaggacggcaccgacgcggtc
ggtaaccgcacccgcgtcaaggtcgtcaagaacaaggtctccccgccgttcaagcaggcc
gagttcgacatcctctacggccagggcatcagccgcgagggttcgctcatcgacatgggc
gtcgagcacggcttcatccgcaagtccgggtcctggttcacctacgagggtgagcagctg
ggccagggcaaggagaacgcccgcaagttcctgctggagaacaccgacgtcgccaacgag
atcgagaagaagatcaaagagaagctcggtatcggcgccgtcgtgaccgctgaagccgat
gacgtcctcccggccccggttgacttctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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