KEGG T02324: BN69

Methylocystis sp. SC2: BN69_2734

Entry

BN69_2734 CDS T02324

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

msc Methylocystis sp. SC2

Pathway

msc03410	Base excision repair
msc03420	Nucleotide excision repair
msc03430	Mismatch repair
msc03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:msc03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:msc03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:msc03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:msc03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

402773299

NCBI-GeneID:

13520307

UniProt:

J7QVD7

Position

2812375..2814132

AA seq 585 aa
MKTFATLYRRIDAATSTQHKRQALTDYLQAAIGAPEQYASAAWTVYFLAGGKPRQMIATK
LLRQLVLDATDLPEWLVDECYHSVGDLAETLALLLPPPTFIEDVPLDVWMNERLLPLRQL
DEGARLSALRDWIDAMPVEDRLPFFKLVTGELRIGVSKLQMTQAIAEATQLDAKLVAQRM
MGYTQANRAPQAQDFIALVAPAEAGEEGRPLRGQPYPFFLAHPLQAPLSAFPELLGPVDD
WLVEWKFDGIRAQFIHRAGAWWLWSRGEELVSDSFPELGALVDFLPDDIVIDGELVVVAP
RSDARSAMDDLRDLRPFSELQQRLGRKVLTPKMLRDRPVALIAYDLLEKDGHDLREKPQR
ERRALLDEVVSRAHFSAMQVGADPPLRLSPALTQPDWEAFARQREEARARGAEGMMLKAM
GAPYGVGRQKSGAHLWWKWKLDPMSVDAVLIYAARGHGRRSGVYSDYTFAVWSGPPEQTD
RTLLPFAKAYSGLSDEEMRKVDATIRRTTIENFGPVRSVRPTMVFELGFEGIGASNRHKS
GIAVRFPRMLRWRQDKPVEDADTIDALRALLPGGARVDDAPNNPP

NT seq 1758 nt +upstreamnt +downstreamnt
atgaaaaccttcgccacgctttaccggcgcatcgacgccgcgacctcgacgcagcataag
agacaggcgctgaccgactatctacaagcggcgatcggcgcgcccgagcaatacgccagc
gccgcctggacggtctattttctcgccggcggcaagccgcgtcagatgatcgcgaccaag
ctgctgcgccaactcgtcttggacgcgacggacctgcccgaatggctcgtcgatgagtgc
taccacagcgtcggcgatctcgccgagaccctggcgctcctgctgccgccgccaaccttc
attgaagacgtcccgctcgacgtttggatgaatgaacggctcctgccattacgccagctt
gatgaaggcgcccgcctgtccgcgctgcgcgactggatcgacgcgatgccggttgaggac
cgcttgccgttcttcaagctcgtcaccggcgaattgcgcatcggcgtgtcgaagctgcaa
atgactcaggcgatcgccgaggcgacgcagcttgacgccaagctcgtggcgcagcggatg
atgggctacacgcaggcgaaccgcgcgcctcaggcgcaagattttatcgcgctcgtcgcg
ccggccgaagcgggcgaagaggggcggccgctgcgcggccaaccctatccattctttctc
gcgcatccgctgcaggcgccgttgtccgctttcccggaactgctcggtcctgtcgatgat
tggctggtcgaatggaaattcgacggcatacgcgcgcaattcattcatcgcgccggcgcg
tggtggctgtggtcgcgcggcgaggagcttgtcagcgacagctttccggagcttggcgcg
cttgtcgattttcttcccgacgacatcgtcatcgacggcgagcttgtcgtcgtcgcgccc
cgttcggacgcgcgttccgcaatggacgatcttcgcgacctgcgccccttttctgaattg
cagcagcgtctcggacgcaaggttctcacgccgaaaatgctgcgcgacaggccggtggcg
ctgatcgcttatgacctgcttgagaaggatggccacgatctgcgcgaaaagccgcagcgg
gagcgccgcgcgcttctcgatgaggtcgtgtcgcgcgcgcatttttccgccatgcaggtc
ggcgccgatccgccgttgcgtctgagccccgcgctgacgcagcccgattgggaagccttc
gcgcggcagcgcgaggaggcgcgggcgcgcggggccgaaggcatgatgctcaaagcgatg
ggcgcgccctatggcgtggggcgccagaagagcggcgcccatctctggtggaaatggaag
ctcgatccgatgagcgtcgacgccgtgctcatctacgccgcgcggggacatgggcgacgc
tccggcgtctacagcgactacacctttgcggtgtggagcggcccgcccgagcagacggac
cgcacgctgctgcccttcgccaaggcctattccggtctttcggatgaggagatgcgcaag
gtcgacgcgacgatcagaaggacgacgatcgagaacttcgggccggtgcgcagcgtgcgc
ccgacgatggttttcgagctcggcttcgagggaatcggcgccagcaatcgccacaaaagc
ggcatcgcggttcgctttccccgcatgttgcgctggcgacaggacaagcccgtggaggac
gccgacacgatcgacgcgctacgcgcgctgttgcctggcggcgcaagagtggacgacgcg
ccgaacaatccgccgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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