KEGG   Myxococcus stipitatus: MYSTI_01497
Entry
MYSTI_01497       CDS       T02436                                 
Name
(GenBank) metallo-beta-lactamase family protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
msd  Myxococcus stipitatus
Pathway
msd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYSTI_01497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msd03019]
    MYSTI_01497
Messenger RNA biogenesis [BR:msd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MYSTI_01497
SSDB
Motif
Pfam: RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Lactamase_B_6
Other DBs
NCBI-ProteinID: AGC42845
UniProt: L7U4S4
Position
complement(1869728..1871374)
AA seq 548 aa
MLQVIPLGGLGEIGLNSLVIACNGEMLLIDAGLMFPSDGMPGVDIIIPDFTHLKQNAAQL
KGVLLTHGHEDHLGALPYLLSELSVPIPVYGTRFTLAMARHRLDELGVEADLREIEPREP
FPVGSMFKVEASRVTHTVPDAVGFIVRTPEGTLIHTGDFKLDPDPIDGLRTDLERWGEAG
DEGVVCLLSDSTNSELTEETGSERVVEQTFERLFRDATGRIVVALFSSNLHRVRHLLALA
ERLGRKVALQGRSMLRNVEMARQLGYLDVPDSLFVPLDTVPILPAQRVLVLTTGAQGEPR
AGLSQLASGDGPLKVGPGDLVVLSSRPIPGNERGVGALIDQLHWRGARVAYAQIEPGVHV
SGHASRPQQKRVLELVRPRHFIPVHGEGRHLHRHLATAREAGLEPAQCLLAQDGDIVGFE
EGRGRFTGSVTSGRIFKDRFGGGMVTSDTLHERVRLSETGLVAAVVVIQRDTLKLVGGPQ
LSGQGLSVDEQVLLPRVAQEARTLFEELSVQLRGDDALVREELTRVVRRAFRLYTSKRPL
VVPMVVRV
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgcttcaagtcattcccctcggcggcctgggagaaatcggcctcaactccctggtcatc
gcctgcaacggggagatgctgctcatcgacgcgggcttgatgttcccttcagacgggatg
cccggcgtcgacatcatcatcccggacttcacccacctgaagcagaacgccgcccagctc
aagggcgtgttgctcacccacgggcatgaagaccacctgggtgcgctcccctacctgctg
agcgagctgtccgtccccatccccgtctacggcacgcgcttcacgctcgccatggcccgc
caccggttggacgagctgggcgtggaagcggacctgcgcgaaatcgagccgcgcgagccc
ttccccgtcgggagcatgttcaaggtcgaagccagccgtgtcacccacaccgtgcccgac
gcggtgggcttcatcgtccgcacgcccgagggcaccctcatccacacgggtgacttcaag
ctggacccggatcccatcgacggcctgcgcacggacctggagcgctggggcgaggcgggc
gacgaaggcgtggtgtgcctgctgtcggactccaccaactccgagctgaccgaggagacg
ggcagcgagcgcgtggtggagcagaccttcgagcggctcttccgcgacgccaccggccgc
atcgtcgtggctctcttctcctccaacctgcaccgcgtgcggcacctgttggccctcgcc
gagcgcctgggccgcaaggtcgcgctccagggccgcagcatgctgcgcaacgtggagatg
gcgcgccagttgggctacctggacgtgcccgactcgctcttcgtccccctggacaccgtg
cccatcctgcccgcgcagcgggtcctggtcctcaccacgggcgcacagggcgagcctcgc
gcgggcctgtcccagctcgcctcgggagatgggcccctcaaggtcggcccgggagacctc
gtcgtgctcagctcccgccccatccccggcaacgagcggggcgtgggcgccctcatcgac
cagctccactggcgcggcgcccgggtggcctacgcgcagatagagcccggcgtccacgtg
tccggccacgccagccggccgcagcagaagcgcgtgctggagctggtgcgcccccgccac
ttcatccccgtccacggcgagggccgccacctgcaccgccacctggccaccgcgcgcgag
gcgggcctggagcccgcgcagtgcctgctcgcccaggacggcgacatcgtcggcttcgag
gagggccgaggccgcttcactggcagcgtgacctccggccgcatcttcaaggaccgcttc
ggcgggggaatggtgacgtcggacacactccatgagcgggtgcgcctgtcggagaccgga
ctcgtggccgcggtggtcgtcatccagcgggacaccctgaagctggtgggggggccccag
ctctccgggcaggggctgtcggtggatgaacaggtgctgctgccccgggtcgcccaggaa
gcccggaccctcttcgaggagctgtccgtccagctccggggggacgacgccctggtgcga
gaggagctcacccgggtggtccgccgtgcgttcaggctgtacacctccaagcgccccctg
gtggtgcccatggtcgtcagggtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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