KEGG   Myxococcus stipitatus: MYSTI_02661
Entry
MYSTI_02661       CDS       T02436                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
msd  Myxococcus stipitatus
Pathway
msd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYSTI_02661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msd03019]
    MYSTI_02661
Messenger RNA biogenesis [BR:msd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MYSTI_02661
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2 AAA_19 Helicase_RecD AAA_30 Flavi_DEAD Methyltr_RsmB-F
Other DBs
NCBI-ProteinID: AGC43977
UniProt: L7U8V3
Position
complement(3352843..3354096)
AA seq 417 aa
MSDSFERLGLSQATLGALRRVRFTQPTPIQSQAIPPALAGKDVIGCAATGTGKTAAYVLP
LVERFASKKGTLALVLAPTRELVQQISEPVQVFAEARGLTQTVIIGGEDMGAQVEALQAQ
PTFVLATPGRLVDLLDTGAARFPKLEALVLDEADRMLDMGFLPQLQRILSALPRKRQTLL
FSATLGADVGRFAREQLVRPVRVAVTRSGTPAERAEQRLYIVKPEEKSALLLSLLAQDST
TALVFAKSKERADKVLRTLQRAGHKSAVLHADRTQNQRRQALEGFRKGTYRCLVATDIAA
RGLDVEDVGQVINFDLPHSPEDYVHRIGRTARAQASGVASTFATSRDKDVVERIERIMRG
QIPRVPVPREDPVFQEAWTHFLASQKDPGPPQQDTAPRSPGQPEGRHARTHRKPRRD
NT seq 1254 nt   +upstreamnt  +downstreamnt
gtgagtgattccttcgaacggctcggactgtctcaagccaccctcggcgcgctgcgccgg
gtgcgcttcacccagcccacgcccatccagtcccaggccatcccccccgccctcgccggc
aaggacgtcatcggctgcgcggccacgggcaccggaaagacggccgcctacgtgctcccc
ctcgtggagcgcttcgcgagcaagaagggcaccctcgcactggtgctcgcccccacccgc
gagctcgtgcagcagatctccgaacccgtccaggtcttcgccgaggcccgaggcctcacg
cagaccgtcatcatcggcggcgaggacatgggcgcccaggtcgaggccctccaggcccag
cccaccttcgtcctcgccaccccgggccgactggtcgacctgctcgacaccggagccgcc
cgcttccccaagctcgaggccctggtcctcgacgaagcggaccggatgctcgacatgggc
ttcctgccgcagctccagcgcatcctctccgcgctgcctcgcaagcgacagacgctgctc
ttctccgcgacgctgggcgcggacgtggggcgcttcgcccgcgagcagttggtccgtccc
gtgcgagtggccgtcactcgcagcggcacccccgccgagcgcgccgagcagcgcctctac
atcgtcaagccggaggagaagtccgcgctcctgctctccctgctcgcccaggactccacc
acggcgctcgtcttcgcgaagtcgaaggagcgcgccgacaaggtcctccgcaccctccag
cgcgcgggccacaagagcgcggtgctgcacgcggaccgcacgcagaaccagcgccgacag
gcgctcgagggcttccgcaaggggacctaccgctgcctcgtggccacggacatcgccgcg
cgcgggctcgacgtggaagacgtgggccaggtcatcaacttcgacctgccccactctccc
gaggactacgtccaccgcatcggccgcaccgcgcgcgcacaggccagcggagtcgcctcc
acgttcgccacctcgcgcgacaaggacgtggtggagcgcatcgagcgcatcatgcgagga
cagattccccgcgtccccgtgccccgcgaggaccccgtgttccaggaggcctggacgcac
ttcctcgcctcgcagaaggacccgggcccgccgcagcaggacaccgcgccgcgctccccg
ggacaacccgagggacgccacgcgcgcacccaccgcaagccccgccgcgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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