KEGG   Myxococcus stipitatus: MYSTI_05097
Entry
MYSTI_05097       CDS       T02436                                 
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
msd  Myxococcus stipitatus
Pathway
msd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    MYSTI_05097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msd03400]
    MYSTI_05097
Enzymes [BR:msd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     MYSTI_05097
DNA repair and recombination proteins [BR:msd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     MYSTI_05097
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Fe-ADH
Other DBs
NCBI-ProteinID: AGC46384
UniProt: L7UIT8
Position
complement(6562933..6564645)
AA seq 570 aa
MKKRKGAGGESPPPATLGFQGDLFGAASAPPRVVALPKKAPPPPPPVDADGTGLLGPLEG
VPAAPPKPERLVLSVGELTRQLKQTLESRFARVLVRGEVTGFRGANARGHWYFSLKDPVA
SIDAKVWASLAGRMRFALRDGMEVLAEGSVDLYEPQGRYSLIVTRLEPVGEGALALAFEQ
LKARLAAEGLIGDRRVRPPRPLPFLPQRIGVVTSRTGAALQDFLRVLHSRNPRLSVLLAD
ARVQGEGSASEVARAIARLSRTDVDVIVVTRGGGSVEDLWTFNEEEVARAIFASPVPVVS
AIGHEIDFTISDFVADWRAATPSAAAERLSPVLADLELSLATQAGRLRRAMERRVLELRE
YQGQLASQLEDPRRMLNHQRLHLSEQVEAMMRVLRPAVRERRESLRALAERLQRSRPQAR
LGEQRAHLLKLAARLSDAARASVSSRQATLSAARLGLERASPVALIAKERARLAAHQARL
RALQQGTLADAQRRFQRLEGRLDAMSPLKVMSRGYSVVFRQRDGGVVRSAADVEVGERLG
IKLAANGARTLGGCEEVEATVTAVKGPVDC
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgaagaagcgcaaaggcgcgggcggcgagtctccgccgcccgccacgttgggattccag
ggggacctgttcggcgcggcctccgcgcctccgcgggtggtggcgttgccgaagaaggcg
ccgccgcctcctccgccggtggacgcggatggaacgggactcctggggccgctcgagggc
gtgcccgctgcgccgcccaagccggagcggttggtgctctcggtcggtgagctcacgcgt
cagctcaagcagacgttggagtcgcgcttcgcccgcgtgctggttcgcggcgaggtgacg
ggttttcgcggcgcgaatgcgcgaggccactggtacttctcgctgaaggaccccgtcgct
tccatcgacgcgaaggtgtgggcgtcgctcgcggggcgcatgcgcttcgcgcttcgcgac
ggcatggaggtgctggccgagggcagcgtggacctgtacgagccgcagggccgctacagc
ctcatcgtcacgcggctggagccggtgggggagggcgcgctggcgctggccttcgagcag
ctcaaggcgcggctcgcggccgaggggctcatcggcgaccgccgcgtgcgtccgcctcgt
ccgctgccgttcctgccccagcgcatcggcgtggtgacgagccgcacgggcgcggcgctg
caggacttcttgcgcgtgcttcattcgcgcaaccctcggctgagcgtgctgctggcggat
gcgcgcgtgcaaggcgagggctccgcatccgaagtcgcccgggcgattgcgcggctgtcg
cgcaccgacgtggacgtcatcgtggtgacgcgtggtggtggctcggtggaggacctctgg
accttcaacgaggaggaggtggcgcgggccatcttcgcttcgcccgtgccggtggtgtcg
gccattggccacgagattgacttcaccatctccgacttcgtggcggactggcgcgcggcc
acgcccagcgcggcggcggagcggctgtcgcccgtgctggcggacctggagctgtcgctg
gcgacgcaggcgggtcggctgcggcgagccatggagcgccgggtgctggagctgcgcgag
taccagggccagctcgcctcccagttggaggaccccaggcggatgctcaaccatcagcga
ctgcacctgtccgaacaggtggaggcgatgatgcgggtgctgcgtcccgcggtgcgcgag
cggcgtgagtcgctgcgcgcgctggcggagcggctgcagcgctctcggccacaggcccgt
ttgggcgagcaacgtgcccacttgttgaagctggccgcgcgtctttccgacgcggctcgc
gcgagtgtgtcctcgcggcaggcgacgttgtcggcggcgcggctgggcctggagcgggct
tctccggtggcgctcatcgcgaaggagcgtgcccggctggcggcccaccaggcgcgactg
cgggcgctccagcaggggacgctggcggacgcgcagcgtcgcttccagcgtctcgaggga
cggctggacgcgatgagtcccctgaaggtgatgtcgcgcggctactccgtggtgttccgc
cagcgtgatggcggggtggtgcgctcggcggcggacgtggaggtgggggagcgcctgggc
atcaagctcgcggcgaatggggcgcggacgctgggcggatgtgaagaagtcgaagccacc
gtgacggctgtaaaagggccggtggactgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system