KEGG   Metallosphaera sedula DSM 5348: Msed_0439
Entry
Msed_0439         CDS       T00509                                 
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
mse  Metallosphaera sedula DSM 5348
Brite
KEGG Orthology (KO) [BR:mse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mse03400]
    Msed_0439
Enzymes [BR:mse01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     Msed_0439
DNA repair and recombination proteins [BR:mse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Msed_0439
 Prokaryotic type
    Msed_0439
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: ABP94616
UniProt: A4YDW4
Position
complement(390681..391988)
AA seq 435 aa
MPCAFVFRRDLRLDDNTCLLRALQECDEVVPVFVLDPRQLGDNPYKSAFALGFMVDSLLD
LDMQLKHRSSRLHILQGYPEKVLPELKVEAIYFNEDYTPFSLNRDNAIRETMRGRVKSCE
DLLLTPKDFFVRKGKPYTVFTHFYNDARKLEVRKPMKNDMRNYLTLDLPGTEVLKLEVER
GIPGGRQEGLKRLERARNLNYSMRNFPGVEGTTKLSPYIKFGVVSPREVYWAVNEEIRRQ
LYWRDFYTLLAYYNPHVFGHSYKREYDCIPWKWNEAHLEAWKQGKTGYPIVDAGMRELNE
TGFMHNRTRMITASFLVKVLHVDWRIGERYFATKLVDYDPSVNNGNWQWVASTGADYMFR
VFNPWLQQRKFDPDAVYIKTWVPELKDLPAEKIHEIYRFKVSGYPSPIVDYSEEVKKARK
MYEDSVALCSKRGLF
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgccctgtgcctttgtgttcaggagagaccttaggctagatgacaacacttgccttctg
agagcgcttcaggaatgcgatgaagtggttccagtattcgtgttggatcccaggcaactg
ggcgataatccatacaagtccgccttcgccttgggcttcatggttgattccctcctggat
cttgacatgcagttgaagcatcgtagttcaaggctccacattctgcagggatatcctgag
aaggtgttgccagagctcaaggttgaggcaatatacttcaacgaagattacactcctttc
agcctgaacagggataacgcaataagggagacaatgcgtggaagggttaagtcatgcgaa
gaccttctcctgacaccaaaggacttcttcgtaagaaagggaaaaccctacacagttttc
acgcacttttataacgatgcgaggaagctcgaggtgaggaaacccatgaagaacgacatg
aggaattacctcactctcgatctccctgggacggaggtcctgaagctggaggtcgagagg
ggtatcccaggcgggagacaggaggggctcaagaggctggaaagggccagaaacctgaac
tactccatgcgtaacttcccaggagttgaaggtactacgaagctctcgccatatatcaag
tttggggttgtctcaccgagggaggtgtactgggcggtcaacgaggagataaggaggcaa
ctgtactggagggacttctacacgcttctggcctactataatccccacgtgttcggtcat
tcgtacaagagggagtacgactgtataccctggaagtggaatgaggctcatcttgaggca
tggaagcagggtaagacgggttatcccatagttgacgcggggatgagggaacttaacgag
actggattcatgcataacagaaccaggatgataacggcctcatttctcgtgaaggtattg
catgtggattggaggataggggagagatacttcgctacaaaactagttgactacgaccca
tcagtaaataacggaaattggcaatgggtggcctcaactggtgcggattacatgtttagg
gtattcaacccttggttgcaacagaggaagtttgacccagatgcggtgtacataaagacg
tgggtaccagaactgaaggatcttccagccgagaagattcacgagatttataggttcaag
gtttcaggctatccctcccccatagtggattatagtgaggaagtcaagaaagctaggaag
atgtacgaagactcggtggcgttatgcagtaagaggggtctcttttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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