KEGG   Mycolicibacterium smegmatis INHR2: LI98_09870
Entry
LI98_09870        CDS       T03432                                 
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
msh  Mycolicibacterium smegmatis INHR2
Pathway
msh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LI98_09870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msh03019]
    LI98_09870
   03110 Chaperones and folding catalysts [BR:msh03110]
    LI98_09870
   03029 Mitochondrial biogenesis [BR:msh03029]
    LI98_09870
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msh04147]
    LI98_09870
Enzymes [BR:msh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     LI98_09870
Messenger RNA biogenesis [BR:msh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LI98_09870
Chaperones and folding catalysts [BR:msh03110]
 Heat shock proteins
  HSP60 / Chaperonin
   LI98_09870
Mitochondrial biogenesis [BR:msh03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    LI98_09870
Exosome [BR:msh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   LI98_09870
  Exosomal proteins of other body fluids (saliva and urine)
   LI98_09870
  Exosomal proteins of breast cancer cells
   LI98_09870
  Exosomal proteins of colorectal cancer cells
   LI98_09870
  Exosomal proteins of bladder cancer cells
   LI98_09870
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AIU20444
UniProt: A0A8B4QFA5
Position
2059929..2061578
AA seq 549 aa
MAKELRFNSDARARLEQGVNALADAVKVTLGPKGRNAILEKLTGPPTITNDGVTIAREIQ
LRDPFANMGAQLVKEVAMKTNGVVGDGTTTATVLAQAMVREGLAAVEAGANPMRVRRGIE
RTVPVVVESLRSHSVEVGSSSDLRRIAALAASDDEAIGDVIAAAVEHVGKTGVVTTEESD
TLGMAVDVVDGIEFDHGYTSGYMVTDPERMEAVLDNPLILLTNKKISQVQEIMPTLEVAK
RADRPLVVIAEDVDGPALQLLVGGNMHKTMQSVVVRAPGFGHRRVAELEDLAVALGGHVI
AKDTGIDLGEVAREHLGSCDRLTATESDTTIVGPRGHQNLVDARVAQLEVQRERARIDAD
RDILDLRIARLTGRVAVIRVGGATSVELKERMLRVEDALAATRAALEAGIVSGGGTALAQ
AHRVLDAVELVGDEAIGRDVVRRALSEPLRWIAFNAGFEGGDVVDVVADLPLGHGFNALT
GEYGDMFEEGIIDPFKVTRAALESAASIAALLITTETAVVEEILGQPGAIMAPGFGDLAE
GMVRPSNIY
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggccaaagaactgcggttcaactccgatgcacgcgctcgtctcgaacaaggtgtcaac
gccctcgccgacgcggtgaaggtcaccctcggcccgaaggggcgcaacgccatcctggag
aaactgaccggtccacccaccatcaccaacgacggtgtgaccatcgccagggagatccaa
ctgcgtgatcccttcgccaacatgggtgcccagttggtcaaggaggtggcgatgaagacc
aacggcgtggtcggtgacggcaccaccaccgccaccgtgttggcgcaggcgatggttcgc
gagggcttggcggccgtcgaggccggcgccaacccgatgcgcgtgcgtcgcggcatcgaa
cgcaccgtgccggtggtcgtcgaatcgctgcgcagccacagcgtggaggtcggcagcagc
agcgacctgcgtcgtatcgccgcgctcgcggccagtgacgacgaagcgatcggcgacgtc
atcgcggccgccgtcgagcacgtcggcaagaccggcgtggtcacgaccgaggagagtgac
accctgggcatggcggtcgacgtcgtcgacggcatcgagttcgaccacggatacacatcc
ggctacatggtgaccgaccccgagcgcatggaggcggtgctcgacaatccgctgatcttg
ttgaccaacaagaagatcagtcaggtgcaggagatcatgcccaccctcgaggtggccaag
cgcgccgaccgcccgctcgtggtgatcgccgaggatgtcgacgggccggcactgcaactg
ctggtcggcggaaacatgcacaagaccatgcaatccgtggttgtgcgtgcgcccggcttc
ggacaccgccgggtcgccgaactcgaggacctggccgtcgcgctcggcgggcacgtcatc
gcgaaggacaccggcatcgacctgggcgaggtggcccgcgagcatctgggatcgtgcgac
cgtctcaccgccaccgaaagcgacaccaccatcgtcggtccgcgcgggcatcagaacctt
gtcgacgcccgtgtcgcgcaactggaggttcagcgcgagcgggccaggatcgacgccgat
cgggacatcctcgacctgaggattgcccggctcacgggacgagtggcagtgatccgcgtc
ggcggtgcgaccagcgtcgaactaaaggaacgcatgctccgggtcgaggacgccctcgcg
gcaaccagggcggcgctggaagccggcatcgtctcgggtggcggtaccgcactcgcgcag
gcgcaccgggtcctcgacgctgtcgagctcgtcggcgacgaggcgatcggccgcgacgtg
gttcgtcgtgcattgtcagagccgttgcgctggatcgccttcaacgccggcttcgaagga
ggcgatgtcgtcgatgttgtcgccgatctaccgctcggacatggcttcaatgcactcacc
ggcgagtacggcgacatgttcgaggaaggaatcatcgacccgttcaaggtgacccgcgcc
gcgctggagagtgccgcctcgatcgccgcgctgctgatcaccaccgagaccgcggtggtg
gaggagatcctcggtcaaccgggcgccatcatggcgcccggcttcggcgatctcgccgaa
ggcatggtccgcccgtccaacatctactga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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