KEGG   Methylocella silvestris: Msil_1395Help
Entry
Msil_1395         CDS       T00802                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
msl  Methylocella silvestris
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:msl00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Msil_1395 (fadB)
   01212 Fatty acid metabolism
    Msil_1395 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Msil_1395 (fadB)
   00650 Butanoate metabolism
    Msil_1395 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Msil_1395 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Msil_1395 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Msil_1395 (fadB)
   00310 Lysine degradation
    Msil_1395 (fadB)
   00380 Tryptophan metabolism
    Msil_1395 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Msil_1395 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Msil_1395 (fadB)
   00281 Geraniol degradation
    Msil_1395 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Msil_1395 (fadB)
Enzymes [BR:msl01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Msil_1395 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Msil_1395 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Msil_1395 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Msil_1395 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1507330..1509477)
Genome map
AA seq 715 aa AA seqDB search
MIFDGETIRVEALGGGLFELRFDRKGEAVNKLDRLAFSELAQAVDALVKTPGLEGALITS
AKDAFIVGADIFEFVDVFQRGEAEVAEFVAANAKIITALSDLPAPTVAAINGLALGGGFE
VALAADYRVIADAAKVGFPEVTLGIFPGYGGTVRLPRLIGLVESANWIISGTPRSAAVAR
DQGAVDAVAAPDSLFETALALLKQAAANPGEWRKRRREGEQSLGMSQETIADYLTGAKVE
AARALPHYPAAHDAVQLLEAAAGLARDEALALEAKTFARTARSQAAASLVGNFVNEQALK
KIGKTYAKTAAPVRKAAVLGAGVMGAGIAYQSAVRGVPVLLKDVSQAALESGMAHAEQLL
DKLVEQGRMPQDRADAVARSIKPTESFDDFSDVDVVVEAIIEDIAIKSSVFRQVEASTDA
KTILASNTSSLQIADLTHGLARPQNFIGMHFFNPVPKMALVEVVRGPKTSEAAVATIVGY
ASAMGKTPVVVGDCPGFVVNRVLTPYLIAFLQLVRDGVDFRQIDKVMEAFGWPMGPAYLI
DVIGLDISHHVVEIVSAGFPERMVAAHPSAIDALKADGRLGQKNGRGFYLYTKDAKGRPR
KETDPAVAALLASVQPQGESSLPDADILERMMIPLILEAARCFEDGVAASPGETDMCLIL
GLGLPRYLGGALRYADWLGLKKIVETAGKWQSLGEIYRPSEKFSALAASGKGFYG
NT seq 2148 nt NT seq  +upstreamnt  +downstreamnt
atgatttttgacggcgagacgatccgggtcgaagcgctcggcggggggcttttcgagctg
cgctttgatcggaagggagaggccgtcaacaagctcgaccgcctggccttcagcgaactg
gctcaggccgttgacgccctcgtcaagacgccgggtcttgagggcgcgctcatcaccagc
gccaaggacgcctttatcgtcggcgcggatattttcgagttcgtcgacgttttccagcgc
ggcgaggcggaagtcgccgaattcgtcgcggccaatgcgaagatcatcacggcgctgagc
gatctgcccgcgccgacggtcgccgccatcaacgggcttgcgctcggcggcggcttcgag
gttgcgctcgccgccgattatcgcgtcatcgccgacgccgcgaaggtcggctttcccgag
gttacgctcggcattttccccggatatggcggcacggtgcggctgccgcgcctgatcggc
cttgtcgagagcgccaattggatcatctccggaacgccgcgctccgccgccgtcgcgcga
gatcagggggcggtcgacgccgtcgccgcgcccgactccctgttcgagacagcgttggcg
ctgctgaagcaggcggccgcgaatcctggcgagtggcgcaagcgccgccgcgagggagag
caaagcctcggcatgagccaggaaacaatcgccgattatctcaccggtgcgaaagtcgag
gcggcgcgggcgctgccgcattatccggccgcccatgacgcggtgcaattgctcgaagcc
gcggccgggctcgcccgcgacgaggcgctggcgctcgaggcgaagacttttgcgcggact
gcgcgttcgcaggcggccgcctcgctggtcggcaatttcgtcaacgagcaggcgctgaag
aaaatcggcaagacatacgccaagacggccgcgccggtgcgcaaggcggcggtcctcgga
gcgggcgtcatgggcgcgggcatcgcctatcagagcgccgtgcgcggcgtgcccgtgctg
ctgaaggacgtctcgcaagctgcgctggaatccggcatggcgcacgccgaacagctcctc
gacaagctggtcgagcagggaagaatgccgcaggatcgcgccgacgcggtcgcgcgctcg
atcaagccgaccgaaagtttcgacgatttttcggatgtggatgtcgtcgtcgaggcgatc
attgaggatatcgccatcaaatcgtccgtcttccggcaagtcgaagcgtcgaccgacgca
aagacgatcctcgcctcgaacacctcatccctgcagatcgccgacctgacccacggcctc
gcgcggccgcagaatttcatcggcatgcatttcttcaatcccgtgccgaagatggcgctg
gtcgaggtggtgcgcggaccgaaaacctccgaagcagcggtcgccaccatcgtcggctat
gcgagcgcgatgggcaagacgcccgtcgtcgtcggcgattgccccggcttcgttgtcaac
cgcgtgctgacgccctatctcatcgcctttctgcaactggtgcgcgacggcgtcgatttc
cgccagatcgacaaggtgatggaagccttcggctggccgatggggccggcctatctcatc
gacgtcatcggcctcgatatttcgcatcacgtggtcgagatcgtctcggccggcttcccg
gagcgcatggtcgccgcgcacccctccgccatcgacgcactgaaggccgacggacgcctc
ggccagaagaacgggcgcggcttttatctctatacgaaggacgccaaggggcgcccgcgc
aaggagaccgatcccgccgtcgccgcgctgctcgcctccgtccagccgcaaggcgaaagc
tccctgccggatgcggatattctcgagcgcatgatgatccccctgattcttgaagcggcg
cgctgcttcgaggatggcgttgcggcgagccccggcgaaaccgacatgtgcctcatcctc
gggcttggcctgccgcgttatcttggcggcgcgctgcgctacgccgactggctggggctg
aagaagattgtcgagaccgccggcaaatggcagtcgcttggcgaaatctaccggccgagc
gagaaattttcggcgctggcggcgagcggcaagggattttatgggtag

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