KEGG   Mycobacterium smegmatis MC2 155: MSMEG_5545Help
Entry
MSMEG_5545        CDS       T00434                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
msm  Mycobacterium smegmatis MC2 155
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:msm00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    MSMEG_5545
Enzymes [BR:msm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     MSMEG_5545
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MSMEG_5545
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(5634240..5635106)
Genome map
AA seq 288 aa AA seqDB search
MPELPEVEALADHLRRHAVGRVVSRVDVSALSVLKTFDPPVAALHGSTVTAAHRWGKYLG
MEVESGGAPLHLITHLSRAGWLRWSDKLAPTPLKPGKGPIALRVHLGDSQGFDLTEAGTQ
KRLAVWVVRDPMDVPQIASLGPDALSLDSTALAGVLAGNSGRIKTVITDQKVMAGIGNAY
SDEILHVAKLSPFTTAGKLTDAQLGALHDAMITVLTDAVSRSVGQQAATLKGEKRSGLRV
HARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq 867 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgcccgaggtcgaggcactggccgatcacctgcgccggcacgcggtcggc
cgggtggtgtcacgcgtcgacgtgtccgcgttgtcggtgctcaagacgttcgatccgccg
gtcgcggcgctgcacggcagcaccgtcacggcggcccatcgctggggcaagtacctcggt
atggaagtcgaatccggcggcgcgccgctgcacctcatcacgcacctgtcacgcgcgggg
tggctgcggtggtcggacaaactcgcacccacgccgctcaagccggggaaggggccgatc
gccctgcgcgtgcatttgggggactcccagggcttcgacctcaccgaggcgggcacgcag
aagcggctcgcggtgtgggtggtccgcgatccgatggacgtcccgcagatcgcgagtctc
ggtcccgacgcgctgtcgctggattcgacggccctggccggggtgctcgcgggcaactcc
gggcgcatcaagaccgtgatcaccgaccagaaggtgatggcgggcatcggcaacgcctac
agtgacgagatcctgcacgtggccaagctgtcgccgttcacgaccgcgggcaagctcacc
gatgcgcaactcggtgcgctgcacgacgccatgatcacggtgctcaccgatgccgtgagc
cgctcggtggggcagcaggccgcgacgttgaagggcgagaaacgctcgggcctacgggtc
cacgcgcgcaccggcctgccgtgcccggtgtgcggcgacaccgtgcgggaggtctcgttc
gccgacaagtccttccagtactgcccgacctgccagaccggcggtaaggtgctggccgac
cggcggatgtcgcgcctgctcaaatag

DBGET integrated database retrieval system