KEGG M.smegmatis: MSMEG

Mycobacterium smegmatis: MSMEG_5912

Entry

MSMEG_5912 CDS M.smegmatis

Gene name gabD2

Definition succinic semialdehyde dehydrogenase

Orthology K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]

Pathway msm00250 Alanine, aspartate and glutamate metabolism
msm00350 Tyrosine metabolism
msm00650 Butanoate metabolism
msm01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Butanoate metabolism
[PATH:msm00650]
Metabolism; Amino Acid Metabolism; Alanine, aspartate and glutamate
metabolism [PATH:msm00250]
Metabolism; Amino Acid Metabolism; Tyrosine metabolism
[PATH:msm00350]

SSDB

Motif Pfam: Aldedh
PROSITE: ALDEHYDE_DEHYDR_GLU

Other DBs NCBI-GI: 118467642
NCBI-GeneID: 4534217
JCVI-CMR: MSMEG_5912
UniProt: A0R4Q0

Position 5971046..5972599

AA seq 517 aa
MPAPSAADFARLRSLVAIEDLDARQSRPIEEVFTGRELTTIPVGTAEDVAAAFAKARAAQ
RGWAHRPVAERAAIMERFRDLVAKNRDFLMDVAQAETGKARSAAQEEIVDMMLNARYYAR
QAVKLLAPKRVQGLLPGVVKTVVNHHPKGVVGVISPWNYPMALSISDSIPALLAGNAVVV
KPDSQTPYCTLANAELLYEAGLPRDLFAVVPGPGSVVGTAIVENCDYLMFTGSTATGRTL
AEQCGRRLIGFSAELGGKNPMIVTRGAKLDVAAKAATRACFSNAGQLCISIERIYVERAV
ADEFTAKFGEQVRSMRLAATYDFTADMGSLISEDQIKTVSGHVDDAKAKGATVIAGGNIR
PDIGPRFYEPTVLTGVTDEMECARNETFGPVVSIYPVESVAEAIEKANDTEYGLNASVWA
GSKTEGEAIAAQLQAGTVNVDEGYALAFGSTAAPMGGMKASGVGRRHGADGILKYTESQT
VATSRVLNLDPPLGISGTLWQKAMTPMIRAVQKLPGR

NT seq 1554 nt +upstreamnt +downstreamnt
atgcccgctccgtccgccgccgacttcgctcgcctgcgcagcctcgtcgccatcgaagac
ctcgacgcacgccagtcgcgcccgatcgaggaggtgttcacgggccgtgaactgaccacg
atccccgtcggcacggccgaggacgtcgccgccgcgttcgccaaggcgcgcgccgcgcag
cggggctgggcgcaccggcccgtggccgaacgcgccgcgatcatggaacgcttccgcgac
ctcgtcgccaagaaccgcgacttcctcatggacgtggcacaggccgagaccggaaaggcc
cgctcggcggcgcaggaagagatcgtcgacatgatgctcaacgcgcgctactacgcgcgt
caggccgtcaaactccttgcgcccaaacgtgtccagggcctgctgccgggtgtggtgaaa
acggtcgtcaaccatcaccccaagggcgtcgtcggcgtgatctcgccgtggaactacccg
atggcgctgtcgatctccgattcgatccccgcgctgctcgcaggcaacgccgtggtggtc
aaacccgacagccagacgccctactgcacgctggccaacgccgaactgctctacgaggcc
ggtctgccacgggatctgttcgcggtcgtgcccggccctggttcggtggtgggcaccgcg
atcgtcgagaactgcgactacctgatgttcacgggttccacggccacgggacgcacgctc
gccgaacagtgcgggcgcaggctcatcgggttctcggccgaactcggcggcaagaacccg
atgatcgtgaccaggggcgccaagctcgacgtggcggccaaggccgcgacgcgggcgtgc
ttctccaacgccggccagttgtgcatctcgatcgaacgcatctacgtcgaacgtgcggtc
gccgacgagttcaccgccaagttcggcgaacaggtccgcagcatgaggctcgccgcgacc
tacgacttcaccgccgacatgggcagcctgatctccgaggaccagatcaagaccgtctcg
ggtcacgtcgacgacgcgaaagccaagggcgccaccgtgatcgcgggtggcaacatccgg
cccgacatcggcccgcggttctacgagcccaccgtgctcaccggcgtcaccgacgagatg
gagtgcgcgcgcaacgagacgttcggccccgtggtctcgatctatcccgtcgaatccgtc
gccgaggccatcgagaaggccaacgacaccgagtacgggctcaacgccagcgtttgggcc
ggcagcaaaaccgagggtgaggccatcgcagcgcaactgcaggccggcaccgtcaacgtc
gacgagggctacgccctggcgttcggcagcacggcggcaccgatgggcggcatgaaggcc
tccggtgtgggccgccggcacggggccgacggcatcctcaaatacaccgaatcccagacc
gtcgccacctcgcgtgtgctcaatctggatccgccgctgggcatctcgggcacgctgtgg
cagaaggcgatgacgcccatgatccgggccgtccagaaactgcccggccgctag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (1)   
   PROSITE (1)   
All databases (17)

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