KEGG T03409: LI99

Mycolicibacterium smegmatis INHR1: LI99_02265

Entry

LI99_02265        CDS       T03409

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

msn Mycolicibacterium smegmatis INHR1

Brite

KEGG Orthology (KO) [BR:msn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msn03032]
    LI99_02265
   03400 DNA repair and recombination proteins [BR:msn03400]
    LI99_02265
Enzymes [BR:msn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LI99_02265
DNA replication proteins [BR:msn03032]
Prokaryotic type
  DNA Topoisomerases
   LI99_02265
DNA repair and recombination proteins [BR:msn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LI99_02265

SSDB

Motif

Pfam:

DNA_gyraseB_C Toprim DNA_gyraseB HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

AIU12354

UniProt:

A0A653FJV8

Position

complement(532150..534183)

AA seq 677 aa
MSYTAADITELDDVQHTRLRPAVNLGLDVLNTALREIVDNAIEEVADPGHGGSTVTITLH
ADGSVSVADDGRGLPVDTDPTTGKNGIVKTLGTARAGGKFSAHKDATSTGAGLNGIGAAA
AVFISARTDVTVRRDGKTFLQSFGRGYPGVFEGKEFDPEAPFTRNDTQKLRGVSNRKPDL
HGTEVRILFDPAIAPDSTLDIGEVLLRAHAAARMSPGVHLVVVDEGWPGEEVPPAVLEPF
SGPWGTDTLLDLMCTAAGTPLPEVRAVVEGRGEYTTGRGPTPFRWSLTAGPAEPATVAAF
CNTVRTPGGGSHLTAAIKGLSEALAERASRMRDLGLAKNEEGPEPQDFAAVTALAVDTRA
PDVAWDSQAKTAVSSRSLNLAMAPDVARSVTIWAANPANADTVTLWSKLALESARARRSA
EGAKARARAASKAKGLGTNLSLPPKLLPSRESGRGSGAELFLCEGDSALGTIKAARDATF
QAAFPLKGKPPNVYGFPLNKARAKDEFDAIERILGCGVRDHCDPELCRYDRILFASDADP
DGGNINSSLISMFLDFYRPLVEAGMVYVTMPPLFVVKAGDERIYCQDESERDAAVAQLKA
SSNRRVEVQRNKGLGEMDADDFWNTVLDPQRRTVIRVRPDESEKKLHHTLFGGPPEGRRT
WMADVAARVDTSALDLT

NT seq 2034 nt +upstreamnt +downstreamnt
gtgagttacaccgccgcagacatcaccgagctcgacgatgtccagcacacgcggctgcgg
ccggcggtgaacctgggcctcgacgtgctcaacaccgccctgcgcgagatcgtcgacaac
gcgatcgaggaggtcgccgatcccggccacggcgggtcgaccgtcacgatcaccctgcac
gccgacggttcggtcagcgtcgccgacgacggccgcggcctgcccgtcgacaccgacccg
accaccgggaagaacggcatcgtcaagacgctgggcacagcccgcgccggcggcaagttc
tccgcgcacaaggacgccaccagcaccggcgccggcctcaacggcatcggcgcggcggcc
gcggtgttcatctccgcgcgcaccgacgtcacggtgcgccgtgacggcaagacctttctg
cagagcttcggccgcggttatccgggcgtgttcgagggcaaggagttcgacccggaggcc
ccgttcacccgcaacgacacccagaaactgcgcggcgtcagcaaccgcaagcccgacctg
cacggcaccgaggtgcgcatcctgttcgaccctgcgatcgcgccggactcgaccctggac
atcggcgaggtgctgctgcgcgcacacgccgcggcgcggatgtcgcccggcgtgcacctg
gtcgtcgtcgacgagggctggcccggcgaagaggtcccgccggcggtgctcgaaccgttc
agcgggccgtggggcaccgacaccctgctcgacctcatgtgcaccgcggcgggcactccc
ctgcccgaggtccgcgccgtcgtggaaggccgcggcgagtacaccacgggccgcggaccg
accccgttccgctggtcgctgacggccggaccggccgaaccggcgacggtcgccgcgttc
tgcaacaccgtgcgcacacccggcggcggatcgcacctgaccgccgcgatcaagggtctg
tccgaggcgttggccgagcgcgcgtcccgcatgcgcgatctgggcctggccaagaacgaa
gaaggcccggaaccacaggatttcgcggccgtgaccgcactggccgtggacacccgcgca
ccggacgtcgcgtgggattcgcaggccaagaccgcggtgtcgtcgcgctcgctgaacctg
gcgatggccccggatgtggcgcgcagcgtgacgatctgggcggccaaccccgccaacgcc
gacaccgtgacgctgtggagcaagctggcactggagtccgcgcgcgcccgccgcagcgcc
gagggcgccaaggcccgcgcccgtgcggcatcgaaggccaaaggtctcggtaccaacctg
tcgctgccgcccaagctgctgcccagccgcgagtcgggccgtggttcgggcgccgaactg
ttcctctgcgagggcgattcggctctgggcaccatcaaggccgcgcgcgacgcgacgttc
caggccgcgttcccgctgaaaggcaagccgcccaacgtctacggtttcccgttgaacaag
gcgcgggccaaagacgagttcgacgcgatcgagcgcatcctgggctgcggcgtgcgcgac
cactgcgacccggaactgtgccggtacgaccggatcctgttcgcctccgacgccgacccc
gacggtggcaacatcaactcgagcctgatctcgatgttcctggacttctaccgtccgctc
gtcgaagccgggatggtgtacgtgaccatgccgccgctgttcgtggtgaaggcaggcgac
gagcggatctactgccaggacgagtccgaacgcgacgcggccgtggcccagttgaaggcg
tcctccaaccgacgcgtggaggtacagcgcaacaagggtctcggtgagatggacgccgac
gacttctggaacaccgtgctggatccgcagcgccgcacggtgattcgggtacgccccgac
gagagcgagaagaagctgcaccacacgttgttcggcggaccgccggagggccggcgcacg
tggatggccgatgtcgccgcccgcgtcgacacctccgcgctggacctgacgtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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