KEGG   Mycolicibacterium smegmatis INHR1: LI99_27365
Entry
LI99_27365        CDS       T03409                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
msn  Mycolicibacterium smegmatis INHR1
Pathway
msn03420  Nucleotide excision repair
msn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LI99_27365
   03430 Mismatch repair
    LI99_27365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msn03400]
    LI99_27365
Enzymes [BR:msn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LI99_27365
DNA repair and recombination proteins [BR:msn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LI99_27365
   MMR (mismatch excision repair)
    Other MMR factors
     LI99_27365
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 AAA_11 DEAD CarD_TRCF_RID Terminase_6N ResIII AAA_16
Other DBs
NCBI-ProteinID: AIU17178
UniProt: A0A8B4QQ79
Position
complement(5622903..5625254)
AA seq 783 aa
MTSPSATPFAAETDQLLDGLNPQQRQAVLHEGSPLLIVAGAGSGKTAVLTRRIAYLLAER
EVGVGQVLAITFTNKAAAEMRERVVQLVGPRAKAMWVSTFHSTCVRILRNQASLLPGLNS
NFSIYDSDDSRRLLMMIGKDLGLDTKRYSPRLLANGISNLKNELIGPEQAAAEASEASDE
MATVIAQVYGEYQRRLRAANALDFDDLIGETVAVLQAFPQIAQYYRRRFRHILVDEYQDT
NHAQYVLVRELVGHHLEDHDGVPPSELCVVGDADQSIYAFRGATIRNIEDFERDFPDATT
ILLEQNYRSTQTILNAANAVIARNTGRREKRLWTDAGQGELIVGYVADNEHDEARFVADE
IDALTDRHGYNYNDIAVFYRTNNSSRALEEVFIRAGIPYKVVGGVRFYERREIRDIVAYL
RVLDNPGDSVSMRRILNTPRRGIGDRAEACVAVYAENTGVSFNEALQAAAEGRVPMLNTR
SEKCIASFVQMLDDLRGKLDEELGDLVEAVLERTGYRRELEASSDPQDLARLDNLNELVS
VAHEFSIDLANAQALAEESDEPVDEDIPDTGVLAQFLERVSLVADADDIPEEGSGVVTMM
TLHTAKGLEFPAVFVTGWEDGMFPHMRALGDPNELSEERRLAYVGITRARQRLYLSRAKV
RSSWGQPMLNPESRFLREIPQELIDWRRIEAPTPAYAAPGRMSSSGGGGIGFGSPRPSPN
RPGGGRNKPLMVLQPGDRVTHDKYGLGRVEEVAGTGESAMSLIDFGSAGRVKLMHNHAPL
QKL
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgacttccccctctgccacccccttcgccgccgaaaccgaccagctcctggacggcctg
aacccgcagcagcgtcaggcggtgctccacgagggttcgcccctgctgatcgtcgcgggc
gcgggttcgggaaagactgccgtgctgacccggcgcatcgcgtacctgctcgctgagcgc
gaggtcggggtggggcaggtactggccatcacgttcaccaacaaggccgccgccgagatg
cgcgagcgcgtggtgcaactggtggggccgcgggccaaggccatgtgggtgtcgacgttc
cactcgacgtgcgtgcggatcctgcgcaaccaggcgtcgctgctgcccgggctgaactcg
aacttctcgatctacgactccgacgattcccggcgcctgctgatgatgatcggcaaggat
ctgggcctggacaccaagcggtactcgccgcggctgctggccaacgggatctccaacctc
aagaacgagctgatcggccccgaacaggccgccgccgaggcgtccgaggcctccgacgag
atggccaccgtcatcgcgcaggtgtacggcgaataccagcgccggctgcgcgcggccaat
gcgctggacttcgacgacctcatcggggagacggtcgcggtgctgcaggcgttcccgcag
atcgcgcagtactaccggcgccggttccggcacatcctggtcgacgagtaccaggacacc
aaccatgcgcagtacgtgctggtgcgtgagctcgtcgggcaccacctcgaggaccacgac
ggcgtgccgccgtcggagctgtgcgtggtgggtgacgccgaccagtcgatctacgcgttc
cgcggcgcgacgatccgcaacatcgaggacttcgagcgcgacttccccgacgcgacgacg
atcctgctggaacagaactaccggtcgacgcagacgatcctcaacgccgcgaacgcggtg
atcgcccgcaacaccgggcgtcgcgagaagcgcctgtggaccgacgcaggccagggtgag
ctgatcgtcggctacgtcgccgacaacgagcacgacgaggcccggttcgtcgccgacgag
atcgacgcgctcaccgaccggcacggctacaactacaacgacatcgcggtgttctaccgc
accaacaactcctcgcgtgcgctggaagaggtgttcatccgcgcgggcatcccgtacaag
gtcgtcggcggcgtgcggttctacgagcgccgcgagatccgcgacatcgtcgcctacctg
cgcgtgctcgacaatcccggcgactcggtgagcatgcggcgcatcctcaacacgccgcgc
cgcggcatcggcgaccgtgccgaggcgtgcgtcgcggtgtacgccgagaacaccggcgtg
agcttcaacgaggcgctgcaggccgccgccgagggccgcgtgccgatgctcaacacacgc
tcggagaagtgcatcgcgagcttcgtacagatgctcgacgacctgcggggcaagctcgac
gaagaactcggcgacctcgtggaggccgtgctggaacgcaccggctaccgccgtgagctc
gaggcgtcgagcgatccgcaggatctggcccgtctcgacaacctcaacgaattggtcagc
gtcgcacacgagttcagcatcgacctggccaacgcacaggccctggccgaggagagcgac
gagcccgtcgacgaggacatccccgacacgggcgtgctggcgcagttcctcgagcgggtg
tcgctggtcgccgacgccgacgacatccccgaagagggctccggtgtggtgacgatgatg
acgctgcacaccgccaagggcctggagttccccgcggtgttcgtcaccggttgggaggac
ggcatgttcccgcacatgcgggcactcggtgaccctaacgaactgtccgaggaacgccgc
ctggcctacgtcggcatcacgcgcgcccgccagcggctctacctcagccgggccaaggtg
cgctcgtcgtgggggcagcccatgctcaacccggaatcgcgcttcctgcgcgagatcccg
caggaactcatcgactggcgccgcatcgaggcgcccacgccggcgtacgccgcaccgggc
cgcatgtcctcctccggcggcggcggtatcggcttcggttcaccgcggccctcgccgaac
cgccccggcggtggccgcaacaagccgttgatggtgctacagcctggtgaccgcgtgacc
cacgacaagtacggtctcggccgcgtcgaggaggtcgcgggcaccggcgaatccgcgatg
tcgctcatcgacttcggcagcgccggccgcgtcaagctcatgcacaaccacgcgccgctg
cagaagctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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