KEGG   Mycobacterium gilvum Spyr1: Mspyr1_12530Help
Entry
Mspyr1_12530      CDS       T01376                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
msp  Mycobacterium gilvum Spyr1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:msp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Mspyr1_12530
Enzymes [BR:msp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Mspyr1_12530
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Mspyr1_12530
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1275204..1276067
Genome map
AA seq 287 aa AA seqDB search
MPELPEVEALADHLRRHAVGLTVGRVDVASLSVLKTFDPPVSALVGREVTAANRWGKYLG
LQAGDLHLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGEAPGYDLTEAGTQK
RLAVWLVTDPLAVPQIASLGPDALSLTLPAFTEMLSGESGRIKTVITDQKVISGIGNAYS
DEILHVARLSPFATANKLTEAQRADLYDAMITVLTDAVTRSVGQQAATLKGEKRSGLRVH
ARTGLPCPVCVDTVREVSFADKSFQYCATCQTGGKVLADRRMSRLLK
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagttgcccgaggtcgaagcgctcgccgaccacctgcgccgccacgccgtcggt
ctgaccgtcggccgggtcgacgtcgcgtccctgtcggtgctcaagacgttcgatccgccg
gtgtccgcgctcgtcggccgggaggtcaccgccgccaaccggtggggcaagtacctcggc
ctgcaggccggtgacctgcacctgatcacccatctgtcccgggccgggtggttgcgctgg
tcggacaagctcgccgccgcgccactcaagcccggcaaggggccgatcgcgctgcgggtg
cacctcgggacgcccggtgaggcgcccggatacgacctgaccgaggccggaacccagaaa
cgcctcgcggtgtggctggtcaccgatcctctggcggtgccgcagatcgcgtcgctgggg
ccggacgcgttgtcgctgacgctgccggcgttcaccgagatgctctcgggggagtcgggc
cgcatcaagaccgtcatcaccgaccagaaggtcatctccggcatcggcaacgcctacagc
gacgagatcctgcacgtcgcgaggctctctccgttcgcgacggccaacaagctcaccgag
gcgcagcgcgccgacctgtacgacgcgatgatcacggtgctcaccgacgcggtgacccgg
tcggtcgggcagcaggccgcgacgctgaagggcgagaaacggtccgggctgcgcgtgcac
gcccgcaccgggctgccgtgcccggtctgcgtggacaccgtgcgggaggtgtcgttcgcc
gacaagtcgttccagtactgcgcgacgtgccagacgggcggcaaggtgctcgccgaccgc
aggatgtcccggctgctgaaatga

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