KEGG   Mycobacterium gilvum Spyr1: Mspyr1_35340Help
Entry
Mspyr1_35340      CDS       T01376                                 

Definition
bifunctional DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
msp  Mycobacterium gilvum Spyr1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:msp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Mspyr1_35340
Enzymes [BR:msp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Mspyr1_35340
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Mspyr1_35340
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(3656574..3657422)
Genome map
AA seq 282 aa AA seqDB search
MPELPEVEVVRRGLAAHVTGRTISAVRVHHPRAVRRHEAGPADLTARLLDSVITGTGRRG
KYLWLTLGDGSAVVVHLGMSGQMLLGPVRNENHLRIAVLLDDGTALSFVDQRTFGGWMLA
DLVTVDGSDVPAPVAHIARDPLDPLFDRAAVVNVLRRKHSEIKRQLLDQTVVSGIGNIYA
DESLWRAKINGARLASGVSKAKLAELLDAATDVMTDALAQGGTSFDSLYVNVNGESGYFD
RSLDAYGREGEPCRRCGAIMRRDKFMNRSSFYCPRCQPRPRV
NT seq 849 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactcccggaggtggaggtcgtccgccggggattggcagcacacgtcaccggc
aggacgatctcagcggtccgcgtgcaccatccgcgggccgtccgccggcatgaggccggt
ccggccgatctgacggcgcggctgctggactccgtgatcaccggcaccggacgccggggc
aaatacctgtggctgacgctcggcgacggctccgcggtcgtcgtgcatctcgggatgagc
ggccagatgctgctcgggccggtgcgcaacgagaatcacctgcgcatcgccgtgctgctc
gacgacggcaccgcgctgagcttcgtcgaccagcgcacgttcggcggctggatgctcgca
gacctggtgaccgtggacggctccgacgtcccggcccccgtcgcgcacatcgcccgcgat
ccgctcgacccgctcttcgaccgcgccgcggtggtgaacgtgttgcggcgcaagcactcc
gagatcaagcggcagttgctggaccagacggtggtgtcggggatcggcaacatctacgcc
gacgaatcgctgtggcgggccaagatcaacggcgcgcgcctggcgtcgggggtctccaag
gccaaactcgccgaactgctggatgcggcgaccgacgtgatgaccgatgcgctcgcccag
ggcggtacctcgttcgactcgctgtatgtcaacgtcaacggggagtcgggctacttcgac
cgctcgttggatgcctacgggcgcgagggcgagccgtgccggcgttgcggtgcgatcatg
cggcgtgacaagttcatgaaccgctcgtcgttctactgcccgcgctgccagccgcgcccc
cgggtctga

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