KEGG T01438: MSU

Mycoplasma suis Illinois: MSU_0877

Entry

MSU_0877          CDS       T01438

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

mss Mycoplasma suis Illinois

Brite

KEGG Orthology (KO) [BR:mss00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mss03032]
    MSU_0877 (topA)
   03400 DNA repair and recombination proteins [BR:mss03400]
    MSU_0877 (topA)
Enzymes [BR:mss01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MSU_0877 (topA)
DNA replication proteins [BR:mss03032]
Prokaryotic type
  DNA Topoisomerases
   MSU_0877 (topA)
DNA repair and recombination proteins [BR:mss03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MSU_0877 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim GFA RNA_POL_M_15KD Toprim_4 NgoMIV_restric

Other DBs

NCBI-ProteinID:

ADX98387

UniProt:

F0QSB7

Position

complement(730676..733060)

AA seq 794 aa
MRELMFVESPAKIKSISKYLSGRNLKVFATYGHIRELSKGWLNFGPDNFEIKWSNIERKI
SYENKKVSIIEAIKNEAKQASKIYLSTDPDREGEAIAWHIYSILGKEHQKKCSRAVFNEI
TESAVKYSLENTRQLDQAQINSYLARVLLDRWIGFNLSSYVRKKVGGQSAGRVQSIALKF
LADRDEEIKSFQPKNWFILKVQLQVGLTITLFKLSEAAESQVVLSPHGKKGVVSFQKKED
LERIINDHLDDHYILEEIGEKKLETSSPPEVLKTSTLFELAINKLGLKAEDVRRVAQSLY
EGINLGGETISLITYPRTDRSSVSEEFLKLVKKFILKEYGETYWVEEGTLKKKSIMGKKE
IFIQGAHEGIRPTDVELTPQKLSKLLSTSSLEFQLYRLIWSYTVASFFPSSRNEKRRYVF
ENQGNFFYASESSEVFDGYKYILRENGLLESREKSEFDFKQLIKNNKYLSKEDIIMEERN
SPPSKYSEATLIKALENKGIGRPSTYPLISEIVRTRNYANFKNKKFEITELGYKVSKDLD
QNFSNFISYDYTRTMEEELDNISKLKTDWKKFLEGVFIAWNDSLKGAEKAEIVKDKSCPE
CGSQCVYKFSRKNHNKFIGCIDFPKCKFVENIEQPQKEVELLDKLCSECKSPLAKKKNRW
GNEFISCSNYPKCKYIERNKQEYETVENSFCPECNSQLVYKNSKRKGNKFIACSGFPNCR
YSSTLEGKRIESKGNSKSNKPPEKLDRKCPKCKKNYLQIKMSRKGTKFISCSGYPRCKYV
EWMDKEGETENKSS

NT seq 2385 nt +upstreamnt +downstreamnt
atgagggagttgatgtttgtcgaatccccagctaagattaaaagcatttccaaatatctt
tcaggtagaaacctgaaagtatttgctacttatggacacataagagagttatctaaaggt
tgacttaattttggaccagataattttgaaattaaatggtccaatatagagagaaaaatt
tcttatgagaataagaaagtttctattatagaagccataaaaaatgaggctaaacaagcc
tcaaaaatttatttatctacagacccagatagagaaggagaagctatagcttgacacatt
tactctattcttggaaaagaacatcaaaaaaagtgttctagagcagtatttaacgaaatt
actgaaagtgccgttaaatactctctagaaaatacaagacaactagatcaagcacaaatt
aattcctatctagcaagagtattgctagatagatgaataggtttcaatctatctagttat
gttcgaaaaaaagtaggaggtcaatcagcaggaagagtgcaatcaattgcacttaaattc
ctagctgatagagatgaagaaataaaatcttttcaacctaaaaattgatttattttgaaa
gtccaactacaagttggactaacaataacattatttaagctttctgaagctgcagaatcc
caagtggtgttgtcaccacatggtaaaaaaggagttgttagcttccaaaagaaagaagat
ttagaaagaataattaatgatcatttagatgatcattacatactagaagaaattggagaa
aagaagttagagacttcttctcctccagaagtattaaaaacttccactttatttgaacta
gctattaataagctaggtctaaaagcagaagatgtcagaagagtagctcaaagtctttat
gaaggtattaatttaggaggagaaaccatatccctaattacataccccagaacagacaga
tcttctgtttctgaagaatttcttaagttagttaagaaattcattctaaaagaatatgga
gaaacctactgagttgaagaaggaactctaaagaaaaaaagcattatgggaaaaaaagaa
attttcattcagggagctcatgagggaataagacctactgatgtggagttaactccacaa
aagttatctaaattactttctacttcatctttagagttccaactatatagattgatttgg
tcttatacagtagcttcttttttcccttcctccaggaatgaaaaaagaagatatgtattt
gaaaatcaaggtaattttttttatgcttctgaaagttcagaagtatttgatggttataag
tacattcttagagagaatggacttctagaaagtagagagaagtcagaatttgacttcaaa
caacttatcaagaataataagtatttatcaaaagaagacattattatggaggagagaaat
tctcctccatctaaatatagtgaagctacactaataaaggctctagaaaataagggaata
ggtagaccttctacttatcccttaatttctgaaatagttagaacaagaaattatgctaat
ttcaaaaataaaaaatttgaaattacagaattaggatataaagtttcaaaagatttagat
caaaacttctctaactttatatcctatgactatacaagaactatggaagaagaattagat
aatatatctaagttaaagactgactgaaagaaatttcttgaaggagtctttatagcttga
aatgactccctaaagggagctgaaaaagctgaaatagttaaggataaaagttgccctgaa
tgtggaagtcaatgtgtttataaattttctagaaagaatcacaacaaatttattggttgt
attgattttcccaaatgtaaatttgtggaaaatatagagcaaccacaaaaagaagttgaa
cttttagataagttgtgttctgagtgtaagagtccactagctaaaaagaagaatagatga
ggaaatgagttcatttcctgttctaattaccctaaatgtaagtacatagaaagaaataaa
caagaatatgagactgtagagaattcattctgtccagaatgtaattctcaattagtctat
aagaattcaaagagaaaagggaacaagtttatagcttgttctggtttccctaattgtaga
tattcttctaccctagaaggtaaaagaatagaaagtaagggaaattctaaaagtaataag
cctccagaaaaattggacagaaaatgtccaaaatgtaagaaaaactacttacaaataaaa
atgagtagaaagggaactaaatttatttcttgttctggttatccaagatgtaaatatgtg
gagtgaatggacaaagaaggggaaacagaaaataaaagcagttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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