KEGG   Mannheimia succiniciproducens: MS1944Help
Entry
MS1944            CDS       T00201                                 

Gene name
nei
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
msu  Mannheimia succiniciproducens
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:msu00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    MS1944 (nei)
Enzymes [BR:msu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     MS1944 (nei)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MS1944 (nei)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1920874..1921752
Genome map
AA seq 292 aa AA seqDB search
MRNPNFCSGFLLCRQNPDRNTVMPELPEVETAKNGITPYLEGYLIEKIIVRQPKLRWEVS
PQLAQISQQKITALSRRAKYLIIHTEQGYIIGHLGMSGSVRIVSARDPVDKHDHLDIVMN
NGKIMRYNDPRRFGTWLWSANLDEFHLFLKLGPEPLSDEFNAEYLFKKSRKKQTPVKNFL
MDNSVVVGVGNIYANETLFMCGLHPEKITAKLTKAQCALLVEKIKQELKRAIEQGGTTLK
DFLQPDGRPGYFAQELQIYGKKGAPCPNCGTKIESLVVAQRNSYFCPKCQKK
NT seq 879 nt NT seq  +upstreamnt  +downstreamnt
ttgagaaacccgaacttttgttcgggttttttgttatgtcgccagaaccccgataggaat
acagtcatgcctgaattacccgaagtcgaaaccgctaaaaatggtattacgccttattta
gaaggttatctcattgaaaagattattgttcgtcagcctaaattacgctgggaagtcagc
ccgcagctggcacagatttctcaacaaaaaattaccgcactttcccgccgggcaaaatat
ctgattattcatacggaacaaggctatatcataggacatttggggatgtcgggctcggtg
cgaattgtatccgctcgggatcccgtcgataaacatgaccacttggatattgtaatgaat
aacggcaaaattatgcggtataacgatcctcgccgttttggcacctggctttggagcgcc
aatcttgatgaatttcatctgtttttaaaattaggtcctgagccgctttccgatgaattt
aacgcggaatatctgttcaaaaaatcacgcaaaaaacaaacgcccgttaaaaactttttg
atggataattcggttgttgtgggtgtaggcaatatctacgccaatgaaactctgtttatg
tgcggtttacatccggagaaaatcaccgccaaactgacaaaagcgcaatgtgcgttactg
gtggaaaaaatcaaacaagaactcaaacgggctatcgaacagggcggaaccaccctgaaa
gactttttacaacccgacggcagacccggttatttcgcgcaggagctacaaatttacggc
aagaaaggtgcgccctgcccaaactgcggtacaaaaatcgaaagtttggtggtcgcccaa
cgaaacagttacttctgcccgaaatgccagaagaaataa

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