KEGG   Methanosarcina siciliae HI350: MSSIH_0167
Entry
MSSIH_0167        CDS       T03864                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
msz  Methanosarcina siciliae HI350
Brite
KEGG Orthology (KO) [BR:msz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:msz03016]
    MSSIH_0167
Enzymes [BR:msz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     MSSIH_0167
Transfer RNA biogenesis [BR:msz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    MSSIH_0167
 Prokaryotic type
    MSSIH_0167
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AKB30857
UniProt: A0A0E3P9Z1
Position
206387..207196
AA seq 269 aa
MRVALKLAYIGTEFHGSQIQPNVETVEKELFKALRNLRIIESPKSASYTCAGRTDAGVHA
LGQVVAFDTEKPNLAIPRVINSELPPAIWAWAHAEVPYYFDARRSAVSRHYRYVMSGDDY
DISKMREASKLLLGTHNFENFSRANGEKSTVRTLERINVRLDGEITKIDVVGNSFLWNMV
RKIVTALSMIGNGVRDNDWLLQMLNPDIYEEGIEPAPPYGLTLMGVNYGENIEWIEDDYS
IRRAGEQNHKRILRHRVMAEVLEELISHE
NT seq 810 nt   +upstreamnt  +downstreamnt
atgagagtcgctttaaaacttgcatacataggcaccgagtttcatgggtcccagattcag
ccgaatgttgagaccgtggagaaagaactcttcaaggctcttcggaacctcaggattata
gaaagccccaaatctgcgagctatacctgtgcgggcaggactgatgcaggagtccatgcc
ctcggacaggttgttgcttttgatacggaaaaaccgaacctggcaattccaagagttatc
aactccgaactccctccggccatatgggcatgggctcatgcggaagtcccctactacttt
gatgcaaggagaagtgcggtttccaggcattaccgctacgtgatgagcggcgatgattat
gatatttcaaagatgagggaagcttcaaaactgttgctcggaacccacaattttgaaaat
ttttccagggcaaacggtgaaaaaagtactgttcgcactctggagaggatcaacgtccgt
ttagacggggaaattacaaagattgatgttgttggtaacagttttctctggaacatggta
agaaaaatagtgacagctctctcaatgatcggaaacggggtgcgtgataatgactggttg
ctccagatgctgaatcccgatatttatgaagaaggaatcgaaccggctcctccctacggg
ctaacccttatgggagtaaattatggagaaaatatagaatggattgaagatgattactcg
atcaggcgggcaggtgagcagaaccacaaacgcattctcagacacagggtaatggctgag
gtgctggaagaactgatttcccatgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system