KEGG   Mycobacterium tuberculosis KZN 1435: TBMG_03685
Entry
TBMG_03685        CDS       T00940                                 
Name
(GenBank) DNA topoisomerase I topA
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
mtb  Mycobacterium tuberculosis KZN 1435
Brite
KEGG Orthology (KO) [BR:mtb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtb03032]
    TBMG_03685
   03400 DNA repair and recombination proteins [BR:mtb03400]
    TBMG_03685
Enzymes [BR:mtb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     TBMG_03685
DNA replication proteins [BR:mtb03032]
 Prokaryotic type
  DNA Topoisomerases
   TBMG_03685
DNA repair and recombination proteins [BR:mtb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      TBMG_03685
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 DUF2092
Other DBs
NCBI-ProteinID: ACT26792
Position
complement(4071170..4073974)
AA seq 934 aa
MADPKTKGRGSGGNGSGRRLVIVESPTKARKLASYLGSGYIVESSRGHIRDLPRAASDVP
AKYKSQPWARLGVNVDADFEPLYIISPEKRSTVSELRGLLKDVDELYLATDGDREGEAIA
WHLLETLKPRIPVKRMVFHEITEPAIRAAAEHPRDLDIDLVDAQETRRILDRLYGYEVSP
VLWKKVAPKLSAGRVQSVATRIIVARERDRMAFRSAAYWDILAKLDASVSDPDAAPPTFS
ARLTAVAGRRVATGRDFDSLGTLRKGDEVIVLDEGSATALAAGLDGTQLTVASAEEKPYA
RRPYPPFMTSTLQQEASRKLRFSAERTMSIAQRLYENGYITYMRTDSTTLSESAINAART
QARQLYGDEYVAPAPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGPNIDDFRLY
ELIWQRTVASQMADARGMTLSLRITGMSGHQEVVFSATGRTLTFPGFLKAYVETVDELVG
GEADDAERRLPHLTPGQRLDIVELTPDGHATNPPARYTEASLVKALEELGIGRPSTYSSI
IKTIQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDEIAAGNERR
TNWLNNFYFGGDHGVPDSVARSGGLKKLVGINLEGIDAREVNSIKLFDDTHGRPIYVRVG
KNGPYLERLVAGDTGEPTPQRANLSDSITPDELTLQVAEELFATPQQGRTLGLDPETGHE
IVAREGRFGPYVTEILPEPAADAAAAAQGVKKRQKAAGPKPRTGSLLRSMDLQTVTLEDA
LRLLSLPRVVGVDPASGEEITAQNGRYGPYLKRGNDSRSLVTEDQIFTITLDEALKIYAE
PKRRGRQSASAPPLRELGTDPASGKPMVIKDGRFGPYVTDGETNASLRKGDDVASITDER
AAELLADRRARGPAKRPARKAARKVPAKKAAKRD
NT seq 2805 nt   +upstreamnt  +downstreamnt
ttggctgacccgaaaacgaagggccgtggcagcggcggcaatggcagcggccggcgactg
gtcatcgtcgagtcgcccaccaaggcgcgcaagctggcctcctacctgggctctggctac
atcgtcgagtcctcccgggggcacatccgtgacttgccgcgggccgcgtcggatgtaccc
gcaaagtacaagtcgcagccgtgggcgcggctcggggtcaacgtcgacgccgacttcgaa
ccgctctacatcatcagcccggagaaacggagcaccgtcagcgagctcaggggcctgctc
aaagacgtggacgagctgtatctggccacggatggggaccgtgagggcgaagctattgcc
tggcatctgctggaaaccctcaaaccgcgcataccggtaaagcggatggtcttccacgag
atcaccgaaccggcgatccgcgccgccgccgagcacccccgcgacctagacatcgacctg
gtcgacgcgcaggagacccggcgcatcctggaccggctgtacggctacgaagtcagccca
gtgctgtggaagaaggtcgcccccaagttgtcggcgggccgggtgcagtcggtggccacc
cgcatcatcgtggcgcgcgaacgcgaccgcatggcgttccgcagcgcggcctactgggac
atccttgccaagctggatgccagcgtgtccgacccggacgccgcgccgcccaccttcagc
gcccggctgacggccgtggctggccggcgggtggccactggccgcgatttcgactcgctg
ggcacgctgcgcaaaggcgacgaagtcattgtgctcgacgaggggagcgcgaccgcgttg
gccgcgggcctggatggcacgcagctgaccgtggcctcggccgaggagaagccctacgcc
cggcgcccgtacccgccgttcatgacctccacgctgcagcaagaggccagccgcaagctg
cggttctccgccgagcggacgatgagcatcgcccagcggctgtacgaaaacggctacatc
acctatatgcgtaccgactccaccacgctgtcggagtcggcgatcaacgccgcacgtacc
caggcgcgccagctctacggcgacgagtacgtcgcgccggcgccgcgccaatacacccgc
aaggtgaagaacgcccaggaagcgcacgaggctatccggcccgccggtgaaacgtttgcc
accccggacgcggtgcgtcgcgaactcgacggtcccaacattgatgatttccggctctat
gagctgatttggcaacgcaccgtagcctcgcagatggccgatgcgcggggcatgacgctg
agcctgcggatcactggcatgtcggggcaccaggaggtggtgttctccgcgaccggacgc
accttgacgttcccgggcttcctcaaggcctacgtggagaccgtggacgagctggtcggc
ggcgaggctgacgatgccgagcggcgactgccccatctgaccccgggtcaacggttggac
atcgtcgagttgaccccagacggccatgccaccaacccgccggcccgctacaccgaggcg
tcgctggtcaaagcgctcgaggagctgggcatcggccgcccgtcgacctactcgtcgatc
atcaagaccatccaggatcgcggctacgtgcacaagaagggcagtgcactggtgccgtca
tgggtggcgttcgcggtaaccggtctgctcgagcagcatttcggtcggctcgtcgactac
gacttcaccgcggcgatggaagacgagctcgacgagatcgccgccggcaacgagcgccgc
accaactggctcaacaacttctactttggtggcgatcacggtgtgcccgattcggtagcc
cgatcgggtggcctcaagaagcttgtcgggatcaatctcgagggcatcgacgcacgagaa
gtaaactctatcaagctttttgacgacacccacggacgccccatatatgttcgggtgggc
aagaacggtccctacctggaacgtttggtggccggcgacaccggtgagcccacgccgcag
cgggccaacctcagcgactcgattaccccggacgagctgactctacaggtggccgaagag
ctctttgccacaccgcaacagggacggactttgggcttggacccagaaaccggccacgag
atcgtggccagggaaggccggtttgggccgtatgtgaccgagatcctgccggagcctgcg
gctgatgcggccgcggccgctcagggagtcaagaaacgccagaaggccgccgggcccaaa
ccgcgcaccggttcgttgctgcggagcatggacctacagacggtcaccctcgaagacgcg
ctgaggctgctgtcactgccgcgcgtggtcggagtggaccccgcctcgggtgaggagatc
accgcgcagaacgggcgctacggaccgtatctaaagcgcggcaacgattctcgatcactg
gtcaccgaagaccagatattcaccatcacgctcgacgaagccctgaagatctacgcagag
ccgaaacgtcgtggccggcaaagcgcttcggctccgccgctgcgcgagctgggaacagat
ccggcgtcgggcaagccaatggtcatcaaggacggccgattcgggccgtacgtcaccgac
ggtgagaccaatgccagcctgcgtaagggcgacgacgtggcttccataaccgacgagcgc
gccgccgagctgttggccgatcgccgagcccggggtccggcaaaacggccagccaggaaa
gctgcccggaaggtgccggcgaagaaggcagccaagcgcgactag

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