KEGG T00053: MT3148

Mycobacterium tuberculosis CDC1551: MT3148

Entry

MT3148 CDS T00053

Gene name

ligB

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

mtc Mycobacterium tuberculosis CDC1551

Pathway

mtc03410	Base excision repair
mtc03420	Nucleotide excision repair
mtc03430	Mismatch repair
mtc03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:mtc03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mtc03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mtc03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mtc03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

3421375..3422898

AA seq 507 aa
MLLHDVAITSMDVAATSSRLTKVARIAALLHRAAPDTQLVTIIVSWLSGELPQRHIGVGW
AALRSLPPPAPQPALTVTGVDATLSKIGTLSGKGSQAQRAALVAELFSAATEAEQTFLLR
LLGGELRQGAKGGIMADAVAQAAGLPAATVQRAAMLGGDLAAAAAAGLSGAALDTFTLRV
GRPIGPMLAQTATSVHDALERHGGTTIFEAKLDGARVQIHRANDQVRIYTRSLDDVTARL
PEVVEATLALPVRDLVADGEAIALCPDNRPQRFQVTASRFGRSVDVAAARATQPLSVFFF
DILHRDGTDLLEAPTTERLAALDALVPARHRVDRLITSDPTDAANFLDATLAAGHEGVMA
KAPAARYLAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRRGKLSNIHLGARDPATGGFVM
VGKTFKGMTDAMLDWQTTRFHEIAVGPTDGYVVQLRPEQVVEVALDGVQRSSRYPGGLAL
RFARVVRYRADKDPAEADTIDAVRALY

NT seq 1524 nt +upstreamnt +downstreamnt
gtgctccttcacgacgtggccatcacctcaatggacgtggccgccacctcgtcgcggctg
accaaggtcgcgcgcatcgccgccctgttgcaccgcgccgcgccagacacacagctggtc
acgatcatcgtgtcgtggctctccggcgagctgccgcaacgccatatcggtgtcgggtgg
gcggcattgcggtccctaccgccgcccgcgccgcaaccggcgttgaccgtcaccggtgtc
gacgccaccctctctaagatcggcactctatcgggcaaagggtctcaggcgcagcgcgcg
gcactcgttgcggaattgttctccgccgcaaccgaagctgagcaaacctttttgttgcga
ctgctcggcggtgaactgcgccagggcgcaaagggcgggatcatggccgatgcggtcgcc
caggccgccgggctcccggccgcgacggtccaacgcgccgcgatgctaggcggcgacctg
gcggcagcggcggcggccggcctgtccggcgcggcgctggacaccttcaccctgcgagtg
ggccgaccgataggcccgatgctggcacagaccgcgaccagcgtccatgatgcactcgaa
cgtcacggcggcacaaccattttcgaggctaaactagacggcgcgcgagtgcagatccac
cgggcaaacgaccaggtcaggatctacacccgaagcctggacgacgtcactgcccggctg
cccgaggtggtggaggcaacactggcactgccggtccgggatctagtggccgacggcgag
gcgatcgcgctgtgcccggacaaccggccgcagcgtttccaggtcaccgcatcacggttc
ggccgatcggtcgatgttgcggctgcccgcgcgacgcagccactttcggtgttcttcttc
gacatcctgcatcgggatggtaccgacttgctcgaagcgccgaccaccgagcggctggcc
gccctggacgcactggtgccggctcggcaccgcgtggaccggctgatcacgtccgatcca
acggacgcggccaacttcctggatgcgacgctggccgccggccacgagggggtgatggcc
aaggcaccggccgctcgttaccttgcgggtcgccgcggagcgggctggctgaaggtcaag
ccggtgcacacactcgacttggtggtgctcgcggtggaatggggctcgggacgccggcgc
ggcaagctctccaatattcacctgggcgcacgcgatccggctaccggtggattcgtgatg
gtgggcaagaccttcaaaggaatgaccgacgccatgctggactggcagaccaccaggttt
cacgagatcgcggtgggtccgacagacggctacgtcgtccaacttaggcccgagcaggtg
gtcgaggtagccctcgacggcgtgcaaaggtcgtcgcgctacccgggcgggctggcattg
cggtttgcccgcgtggtgcgctaccgcgccgacaaggacccggccgaggccgacaccatc
gatgccgtgcgcgcgctctactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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