KEGG T03892: MSTHT

Methanosarcina thermophila TM-1: MSTHT_0559

Entry

MSTHT_0559        CDS       T03892

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

mthr Methanosarcina thermophila TM-1

Brite

KEGG Orthology (KO) [BR:mthr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthr03032]
    MSTHT_0559
   03400 DNA repair and recombination proteins [BR:mthr03400]
    MSTHT_0559
Enzymes [BR:mthr01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MSTHT_0559
DNA replication proteins [BR:mthr03032]
Prokaryotic type
  DNA Topoisomerases
   MSTHT_0559
DNA repair and recombination proteins [BR:mthr03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MSTHT_0559

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim HHH_5 Cdd1 DUF4332 DNA_pol_lambd_f TfoX_C RAD51D_N DUF2283

Other DBs

NCBI-ProteinID:

AKB12317

UniProt:

A0A0E3NAG3

Position

692991..695285

AA seq 764 aa
MHLIVTEKNIAAKRIAAILAPKNPKKDRVSGVDVYRYETVSSDGKKQETAVIGLSGHIVG
IDFPKEYNNWQKVDAKALIDAEIVTTPINRKIVTALRSLGKKASRVTIATDYDREGELIG
VEALNIIKKVNPDVPFDRVRYSAITPKAIEVAFSNPTNVDFNLADAGHSRQVIDLVWGAA
LTRYISLAAGRLGKMFLSVGRVQSPTLSLIVDREKERNIFVPTPYWEIHVELQNAKGETF
SAQHSTRRFLDKKEAEKVFKKLGKQAKLKEIEKGKKTDQPPIPFNTTGFISAANSIGLSP
ANAMRIAESLYTNGYISYPRTDNTVYPDTLDLKAQIEIFREGPFKEYANALLEKAELSPT
RGKKETTDHPPIFPVSLAKKTDLKEDEWKVYELVVRRFFATFAGPSEWETMRLKLDIQGE
EFRANGARLVEPGWRWYYPYNAPEDRLLPELREGDSLEVIKKEILDKETQPPGRYGQGKL
INIMEELGLGTKATRHEIISKLYSRAYIHGNPVQPTNTSFAVVDTLEKYSPAITKPDMTR
QLEENMDLIAEGKIKEAEVLEESRKMLKQVFSELDKNRDKIVESLQAGLREDKIIGICSG
CGNELMIRRSKRGGRFIGCSNYPNCTFSLPLPKSGQIVVIDKMCETHGLHHIRIINSGKR
PWDLGCPQCNFIEWQKIQEEEQAQQPKKERPKSIQDLEGVGKATAGKLEEAGITSVEALA
EADPVELARTIKTSVKKVKNWQVSCNGTVKDTGTVEDSSAIEDA

NT seq 2295 nt +upstreamnt +downstreamnt
atgcaccttatcgtaacggaaaaaaatatagcagcaaagaggattgctgcgattctggct
ccaaagaatccgaaaaaggatagagtcagcggagtggacgtgtaccggtacgagaccgtg
tcctccgatgggaaaaagcaggagactgctgttataggattgtcgggccatattgtaggg
atagattttcccaaggagtacaataactggcagaaggtcgatgctaaagcccttattgat
gccgagatcgtaacaactcctattaaccggaagattgtaactgccctgagaagcctggga
aaaaaggcaagcagggttacaattgccactgactacgaccgagaaggcgaactgatagga
gttgaagcactcaatattataaaaaaggtaaatccagatgttccttttgaccgggtccgc
tacagtgcaataaccccaaaagcaatagaagttgctttttcaaacccgacaaatgtagat
ttcaatctcgcggatgcaggccattcaaggcaggtcatagaccttgtatggggtgcagct
ctcacccgctacatttctcttgctgcaggcaggcttgggaaaatgtttctctcggtaggc
agagtacagtcgcctacgctttctcttattgttgacagggaaaaagaaaggaatattttt
gtcccgactccttactgggagatccatgtcgaacttcaaaatgctaaaggagagactttt
tcagctcagcactcaacccgccgcttcttggataaaaaggaggcagaaaaggtcttcaag
aaactgggaaaacaggcgaagttaaaagaaattgagaaagggaaaaagacggatcagccg
ccgattcctttcaatacaacaggtttcataagcgcagctaattcaatcgggcttagtccc
gcaaatgcgatgcgcatagccgaatccctttacactaacggttatatctcatacccgaga
actgacaatacggtttatcctgatacccttgacctgaaagcccagattgagattttcagg
gagggtccttttaaagaatacgcaaacgccctgcttgagaaagccgaactttcccccacg
cgaggcaaaaaagagactactgaccatccaccgatttttccggtttcccttgcaaaaaag
accgacttaaaagaggatgaatggaaggtttatgagcttgtagtcaggcggttttttgca
actttcgccggaccgagcgaatgggaaaccatgcgtttgaaacttgatattcagggggag
gaattcagagcaaacggagcaaggcttgtagagccgggctggagatggtactatccttac
aatgcgcctgaagacaggctcttacccgaactccgcgaaggcgattccctggaagttata
aagaaagagatactggacaaagaaacccagcctccgggccgctacgggcagggaaagctt
atcaatattatggaggagctggggcttgggacaaaagccaccaggcacgagataatcagc
aagctttattccagagcttacattcacggaaatccggtacagcccacgaatacatctttt
gcagtagtggatacccttgagaaatattctcctgccatcacaaagccggacatgacaagg
cagcttgaagaaaacatggacctgattgctgagggcaagatcaaagaggctgaggtgctt
gaggaatcgcggaagatgttaaagcaggtcttctcagaacttgacaaaaaccgggacaaa
atcgtggaatccctccaggcaggcctcagggaagacaagattataggcatctgctcaggc
tgtggaaacgaacttatgatccggcgttcaaaaagaggaggccgttttataggctgcagc
aactatccaaactgtaccttttccctccccctgccaaaaagcggacagatcgtggtcatt
gacaaaatgtgtgaaacccacggcttgcaccatatccgcataatcaattcaggtaaacgt
ccctgggatctcggctgcccacagtgcaatttcatagaatggcagaaaatccaagaggaa
gagcaggctcagcagccgaaaaaagagcgcccgaaatcaatccaggatctcgaaggtgtg
ggaaaagccacagccgggaaactggaagaagccggaattacaagcgtggaagccctggca
gaagccgatcctgtagaacttgcaagaacaatcaagaccagcgtaaaaaaggttaaaaac
tggcaggtttcatgtaacggcacagttaaagacaccggcactgttgaggacagcagcgca
attgaagacgcgtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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