KEGG   Thermothelomyces thermophilus: MYCTH_2118610
Entry
MYCTH_2118610     CDS       T02231                                 
Name
(RefSeq) hypothetical protein
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
mtm  Thermothelomyces thermophilus
Brite
KEGG Orthology (KO) [BR:mtm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mtm03041]
    MYCTH_2118610
   03009 Ribosome biogenesis [BR:mtm03009]
    MYCTH_2118610
Enzymes [BR:mtm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MYCTH_2118610
Spliceosome [BR:mtm03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    MYCTH_2118610
Ribosome biogenesis [BR:mtm03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    MYCTH_2118610
SSDB
Motif
Pfam: APP1_cat DEAD Helicase_C LNS2
Other DBs
NCBI-GeneID: 11509273
NCBI-ProteinID: XP_003663395
JGI: 2118610
UniProt: G2QCH4
Position
3:complement(join(3790971..3792782,3793617..3793751,3794510..3795206,3795562..3796489,3796589..3797219))
AA seq 1400 aa
MAPSHKRKTIPDDDFIHTISDNDEPEILEDEDEVVAAAMRPSKKAKTSTNTADAGSKNKK
DKTKKKKKNKKGEKGAQDGEEDAQDNDEEEETGLWGANDADDGAMNSDFEFTLGDGNGVN
AFEGEFDGWGFEGAKKGIEGGAAGQEGKAGVDLDEIIRRRREKKKKTKGKEKGEDSKEDQ
EDGEDVEVEDMGEVDLDDEVLADDAFGMGVEEGEGKDRNGEAEDGEDAASDDDSVATPVP
HPDDEKSDDDDDDDDDEEDAEEEAKRKEFFAAPEETEKATKKGGPSSFQSMSLSRPILRG
LTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFIVPILERLLYRPKKVPTTRV
VILTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEGELRLRPDVVIATPGRFID
HMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSTVDKL
IRVGLNKPARIMVDSQKQTAGTLTQEFVRLRPGREEKRMGVEAFRDGKVNFLLATDLASR
GLDIKGIDTVINYEAPQSLEIYVHRVGRTARAGRSGVALTLAAEPDRKVVKAAVKAGKAQ
GAKIISRVIDPAEADKWQAQVDEMDEEIEEILREEKEEKQLAQMEMQVKKGENLIKYEEE
IHSRPKRTWFESQEAKKKAKELGRAELNGIREALKKKGGGKLSNKDKKKLDAKAERTEKK
STGWKKGRAERDGKGAVLNLKKIRKPKAKKGPRLLRFHLDTLSSYKYRLQSRIYRFLVER
QRKRRHRKSIGGAGAAGLSGIPAPTIQSDEEVTEEQRVAREAQEIEKRGQDEKEVANRGG
YSEPPGGSNGNNQASAASPSASPSLPARTPTAPQLDMTEQELAVANANLMARLGPFMTTP
LVQVPITMFFYNEEQSRSHTVTTDDSGHFNVRVPLEFVPTEVRVIANENLSAIRPIEVTG
QKGISLISDVDDTIKQSNISMGAREIFRNALVRDLADLTVDGVEKWYNKMHDMGVKLHYC
SNSPWQLYPVLATFLHTAGLPQGSMHLKHYSGMLQGIFEPVAERKKGTLEAIIRDFPERR
FLLVGDSGEADLEVYTELAVANPGRILAIFIRDVTTPAQTGFFDSSFSVNPGQRSIQGNA
KAMPGARSVGDQFERKPPVPPPPPPPPPPPRVTASPANSGPIMGNLIDFGEPDPIVSTAA
TERLCGREHNRDALGPDGSSSDVARRKPPPPRPVKPAALRSTPSDSSSTNSQRTTSAETG
GGHSLPARPRTSAGTPPPNTSKPTPPPPPPRRRRGTAPAMQQPRSTGDDHIPDVSDAESL
SAMPGGYPAGVADSATPPNGAAAAAAVNKKVDLWLMRLARAHQTLDAQGVKLYTWRRGQD
VIAEAEGLVREALRNMDHGS
NT seq 4203 nt   +upstreamnt  +downstreamnt
atggcgccttctcacaaacgcaagaccattcccgacgacgactttatccacaccatctcg
gacaatgacgagcccgagatcctcgaggacgaggatgaggtagtggctgctgcgatgagg
ccgtccaaaaaggccaagacctccaccaacacggccgacgctggcagcaagaacaagaag
gacaagacgaagaagaaaaagaagaataaaaagggagagaagggtgcccaggatggcgaa
gaagacgcacaagacaatgacgaagaagaagagaccggtctctggggcgccaacgatgcc
gacgacggggcgatgaactcggactttgagttcaccctcggcgacggcaacggggtgaac
gcgttcgagggcgagttcgacggctgggggttcgaaggagccaagaaggggatcgagggc
ggcgccgccgggcaggagggcaaggcaggggtggacctggacgaaatcatccggaggagg
agggaaaagaagaagaagacgaaggggaaggaaaagggagaggactccaaggaggaccag
gaggacggggaggatgtcgaggtcgaggatatgggggaggtggatctagacgacgaggtg
ttggccgatgatgcgttcgggatgggggttgaagaaggggaggggaaggacaggaacgga
gaggccgaggatggagaggacgccgcgtcggatgatgattcggttgctacgcccgtacca
catcccgatgacgagaagtcagacgatgacgacgacgacgatgatgacgaagaggatgcc
gaggaggaggcgaagcggaaagagttcttcgccgcgccagaggagacagaaaaggccacc
aagaagggcggaccgtcctctttccagagcatgtcgctctcgcgacccatcctcaggggt
ctcacgtctgtcggcttcacgaaaccgactcctatccaggccaagacgataccgatcgcc
cttatgggcaaggacgtcgtcggtggtgctgtcaccggttccggcaagacggctgcattt
attgtgcctatcctggaacgtctcctgtaccgacccaagaaggtgccgacgacgagggtc
gtcatcttgacgcccacccgcgagctcgcgatccagtgccactcggtggcgaccaaacta
gcaagccataccgacatcaagttctgtcttgcggtcggtggtctcagcctgaaggtccag
gagggcgagctccgtctgagaccagacgtggtaatagccactccgggtcgcttcatcgac
cacatgcgaaactcagccagctttgctgttgagacggtcgagattctggtgcttgatgaa
gccgacagaatgctcgaggacggtttcgcagacgagctgaacgagattctcacgactctc
ccgaagtcgcgccagacgatgctattctccgccaccatgacctcgacagtcgacaagctc
attcgggtcggcctcaacaagcctgctcggatcatggtggactcgcagaagcagacggcc
ggcaccctcacacaagagtttgtgcggttgcggcccgggcgggaggagaagcgcatgggc
gtcgaggccttcagggacggcaaggtgaatttcctcctcgccaccgacctggcgtctcgt
ggtttggacataaagggcatcgacaccgtcatcaactacgaagccccgcagtccttggaa
atctatgtccatcgtgtaggccgtacggctcgtgctggccgtagcggtgttgccctcacg
ctggcagcggaaccagaccgcaaagtggtgaaggcggcagtcaaggccgggaaagcacaa
ggcgccaagatcattagtcgagtgatcgacccagcagaagcggacaagtggcaggctcaa
gtggacgagatggatgaggagattgaagagattcttcgcgaggagaaggaggagaagcag
ctcgcacagatggagatgcaggtcaagaagggcgagaatctgatcaagtacgaggaggag
atccattcgcggccaaaacggacatggttcgagtcacaggaggccaagaagaaggccaag
gaactcgggcgggctgaactcaacggcatcagggaggcgttgaagaagaaggggggaggc
aagctcagcaacaaggacaagaagaagctcgatgccaaggcggagaggaccgagaagaag
tcgaccgggtggaagaaggggcgagcggagagagacggaaaaggtgcggtattaaacctg
aagaagattcgcaagcccaaggcgaagaaggggccgcgcctcctccgctttcacctcgac
actctctcgagttacaagtaccgcctgcagagccgcatatacaggttccttgtcgagaga
cagcgcaagaggcggcacaggaagagcattggtggtgctggcgctgctgggctgagcggg
atcccggcgcccacaattcaatcggatgaggaggtgaccgaggagcagagggtagcgcgg
gaagctcaagaaatcgagaagcgaggacaggacgagaaggaggttgcgaacaggggaggg
tacagcgaaccccccggtggttccaatgggaacaaccaggcttctgctgcgtcgccatcg
gcgtcgcccagcttgcccgcgagaacgcccaccgcgccacaattggacatgacggagcaa
gagctcgcggttgccaacgcgaacctcatggcacgcctgggaccgttcatgaccacgcca
ttggtccaagtaccaatcaccatgttcttctacaacgaggagcagtcacggtcgcataca
gtaacgacagacgattccgggcacttcaacgtccgggtgcccctcgagtttgtcccaaca
gaggtcagggtcatagcgaacgagaacctctcagccatccggcccatcgaggttaccggc
cagaaggggatcagtctgatcagcgacgtcgacgacacgatcaaacagtccaatatctcg
atgggcgcccgagagattttcaggaacgcgctcgtgcgcgacctggcggatttgactgtc
gatggggtcgagaaatggtacaacaagatgcacgatatgggcgtcaagttgcactactgc
tcaaacagcccgtggcagctgtacccagttctggcgacgttccttcacacggccggactg
cctcagggctccatgcatttaaagcactatagcggcatgctgcaagggatattcgagccc
gttgcggagagaaagaagggcacactggaggccatcattagggactttccagaaagaagg
ttccttctcgttggcgacagcggcgaggcggatcttgaggtctataccgagcttgccgtg
gccaatcctggccgcatcttggccatcttcatccgcgacgtcaccactcctgcgcagacg
ggattctttgattcttcattcagcgtgaatccgggacagcggagcatacaagggaacgcc
aaagccatgccgggcgcccgctcggtcggcgatcagtttgaaaggaaaccaccagtgcct
cctcctcctcctcctcctcctcctcctcctcgagtgacggcttcgccggctaattcggga
cctatcatgggaaacctgatcgactttggcgagccggatcctatcgttagcactgcagcg
accgagaggctctgtggaagagaacataaccgggacgcgttgggacctgatgggtcgagc
tcagacgttgcccgtcgaaaaccaccacctccgcggcccgtcaaacctgcggccttgcgg
agcaccccatcggatagcagcagcaccaacagtcagagaaccacctctgccgaaactgga
ggcggtcatagcttgcctgctcgtccacggacctctgcgggcacgcctcctcccaacact
tcaaagccaacccctccaccacctcctcctcgacgccgccgcggcactgccccggcgatg
cagcagccacgcagtacgggcgacgaccacatcccagacgtatccgatgcagagtctctc
tctgcaatgccaggcggatatcctgccggcgttgcagattcagcgactcctcccaacggc
gcggctgccgccgcagctgtcaacaagaaggtggacttgtggctgatgcggttggcgagg
gcacaccagacgctggatgcgcagggggtgaagctgtatacttggcgaagaggccaggac
gtgattgccgaggcggagggtcttgtgcgggaggcgctgaggaatatggaccacggcagc
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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