KEGG   Thermothelomyces thermophilus: MYCTH_2296735
Entry
MYCTH_2296735     CDS       T02231                                 
Name
(RefSeq) hypothetical protein
  KO
K12609  CCR4-NOT transcriptional complex subunit CAF120
Organism
mtm  Thermothelomyces thermophilus
Pathway
mtm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYCTH_2296735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtm03019]
    MYCTH_2296735
Messenger RNA biogenesis [BR:mtm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MYCTH_2296735
SSDB
Motif
Pfam: PH PH_9 DUF4055
Other DBs
NCBI-GeneID: 11508548
NCBI-ProteinID: XP_003659543
JGI: 2296735
UniProt: G2Q2T1
Position
1:complement(join(4922942..4926559,4926625..4926782,4926842..4927306,4927540..4927555))
AA seq 1418 aa
MGRNRVLSFIAQLSAPHRDSATPTHPANTSSPKSDSLHTKPSLPKQHARTDSADSPASAD
AKRDLASDGPSASSAATTPPSEGEHAATPTSVDNSPSSSPARRSRRSSRPLSMVQTYHPP
VMAVNEQTLPELQPIFTLLNSHANKLYQEGYFLKLDDQDIRGKPNPDRTWTECFAQLVGT
VLSLWDAAELDAAGEDGEVLPKFINLTDASIKMIESLPTKTNDEQPLQNILSISTAGRNR
YLLHFNSHHSLIQWTSAIRLAMYEHSTLQEAYTGALIAGKGKALNNINIIMERARQPIGE
WVRVRFGAGVPWKRCYCVIEPPSEKELQKAQKEAKKRSPYDRSHPPVVKGEIKFFDTKKD
AEKKKKHQRPIASITDAYSAYAIYPQAKELIDSSTLLKVEGNITIHTEPASPTEGFVFIM
PEVPPAVSGFEMLLRFLFPTWDTFALYGRPGRLVASSLDSRSLMFAMPKNKRYGYLDLLD
VSGLILTDGSSSWSEREWRKRLKELTGQRMNAMEEASGSQSRSTSRNSKRLSYGNQNSGS
RPKVGFADDSGSVRSSRSMSLSRPGVRNDSAPPDPNRERAPSAMAGNSRHSRHISDTQIG
DYPPSSALDNPPPGQPTLRTGPDRVRAFASDLASTPERVSSEDDSPTRGPIIAGNLEGIK
RLETPEPVNAPPAFAHGAGSRPQQRPSPSPEMRRATNRLSSTTLSQLARASGLVPDTISD
ELNELHLGSESSGQEPRHADQRGLAVQPQTSANMVEMNANTSRPREVVTPPTSASDAPAP
EAPLEDPSSRPSNFPLGGPSAHSAGNHPPASLHHGPQGGPHPRGRNTPPPGPKQPQQSSP
VAGGSPPIHRKPLPVRTTSLPRDHHDVVSPISTHSSPKGYPSPASGTRFRPMDEFTSPIP
NTHRGQNGERIAGDGRDDASSTTSPDYASTRPSTDTQESAERPRAGVLKVVGSSGDTSAD
KEYDIPEINFGPTLNYAAPVLPTDKAPSKKTPPSSGRKSPGFPKVFSHTRQQSDDTIRRS
VVWPGPSAASSSTDNLASLLQPRTPPAQYAHHRAPSTGTLTDYKASHSRHSSADLLTSGR
LSGQSHSRHSSLDLLSSGRPASRGAENTLSGGEAPKPPSSRGPLHSRNSSADLLALKRPP
SRGAAAVLSAGQVSSHLSAREQEHVARVTGSPLIAFAGSKGPSQTQSGLVGAIDAREREK
AQIKQGISGQAVAQAIDQRQREQNQQAQRAAQVAYAQQQAQFAAQQMPIRPQTPGGRGMM
MGGGMPAPYGPQSPARPQTPGARGMMMDGGAPMPFSPPMGGMNSRSMSPAPGMMSPPGRF
GPAPPQPPSHMMPHAPYGGGAPTGPGWNMGNAPHRQGPHGHHGPMMPSPGMGFAMQQGGR
PQSPGFQLPPQGQYARPGTPGGPRPGTPGRMQYHGQAF
NT seq 4257 nt   +upstreamnt  +downstreamnt
atgggccggaatcgagtcctgtcatttatagcccagctctcggcgcctcacagggattcg
gcgacccctacacatcccgcgaatacatcatcgcccaaaagcgactccttgcacaccaaa
ccctccctgccaaaacagcacgctcgcaccgactcggccgactctcccgcatccgccgac
gcaaagcgggatctcgcaagtgacgggccatctgcctcatcggccgcgacgacaccgcca
tccgaaggcgagcatgccgccacgcccacctcggtagataattcgccgtcatcgagtcca
gcaagaaggtcgaggaggagttcccgaccgttgtctatggtgcagacctaccacccgccc
gtcatggctgtgaacgagcagaccctcccggaactgcagccgatcttcacgctgctcaac
agccacgccaacaagctgtaccaggaaggctacttcttgaaactggatgaccaggacatc
cgaggaaaacccaaccccgaccggacatggactgaatgctttgcgcaactggtgggcact
gtgctgtcgctttgggatgccgctgaactagacgctgcgggggaggacggagaagtcctc
cccaaattcatcaacctcactgatgcgtcgatcaagatgatcgagtccctcccgacgaag
accaacgatgaacagccgctccaaaacatcttgagcatcagcaccgccggccgcaaccga
tatctgctccacttcaactctcaccactccctgatccagtggacctcggcaatacggctg
gccatgtacgagcattccacgctccaggaagcttacacgggcgccctcatcgccggcaag
gggaaagcgctgaacaacatcaacatcatcatggagcgggcgaggcagccgattggggaa
tgggtgcgggttaggttcggcgcaggtgttccctggaagcggtgctattgtgtcatcgaa
ccgccgagcgagaaggagttacagaaagcgcagaaggaggcaaagaagcggtcgccttat
gaccggtctcacccccccgtcgtcaagggcgagatcaagttcttcgatacgaagaaggac
gcagagaaaaagaagaagcatcagcgcccgatcgcatccatcaccgacgcctactcggcc
tacgccatctacccgcaagcgaaggagctgattgattcctccacgctgctaaaggtggag
ggcaacatcacaatccacaccgagccagcgtcccccaccgaagggttcgtcttcatcatg
cccgaggtccctcctgccgtgtccggctttgaaatgctgctccggttcttgttcccgacg
tgggacacctttgccttgtatggtcgaccgggccgcttggtggctagcagcctggacagt
cgttccttgatgttcgcgatgccaaagaacaagagatacggctatctcgacctgctggat
gtgagcgggctgatcctcaccgacgggagctcctcttggtcggagcgagaatggcgaaaa
cgactcaaagagctgacaggtcaacgaatgaatgccatggaagaggcgtccggaagccaa
agtcggagcacaagccgaaacagcaagcggctcagttacgggaaccaaaactcgggatct
cgaccgaaggtgggctttgcggacgacagtggctctgtgaggtcatcacgatcaatgtcg
ctgtcgcggcctggcgtgcgcaacgactcggctcctcccgacccgaaccgggaacgggcg
ccgtcagcaatggcgggcaattctaggcactcccgccacatatcagacacgcaaataggc
gactatccgccgagctcggctctcgacaacccaccgcccgggcagcccacactacgcacc
ggccccgatcgcgtccgggcttttgccagcgacttggcctccacccccgagagagtcagc
tccgaggatgacagcccgactagaggtcctataatagctggtaaccttgagggcataaag
cgcttggagacgcccgaaccggttaatgcccctccggcttttgctcacggcgcaggttcc
cgtccgcagcagagaccctcgccttcgccggagatgcgtagagcaaccaatcgtttgtct
agcacgacgctctcccagctcgcgagagcctccggtcttgtccccgataccatctcggac
gaactcaacgaacttcacctcggaagcgaaagctctggccaggagccgagacatgccgac
cagcgaggtctagcggtacagccacaaaccagcgccaacatggtggagatgaatgctaat
accagtcgccctcgtgaagtggtaacgccacccacgtcagcttccgacgctccagccccc
gaggctccgctcgaagacccatcctcgcggccatcgaactttcctcttggaggcccctcg
gcgcattcggctggcaaccacccacccgcatctctccaccatggccctcagggtggccct
catccccgcggtcgcaacaccccccctcccggacccaaacaaccacagcaatcctcaccg
gtagcaggcggctcgccacctatccacaggaagcccctacccgtgaggacgacaagtctg
ccccgtgaccaccatgacgtagtctccccgatctccacacattcatctcccaaaggttat
ccttctcccgcttcgggaacccgctttcgaccaatggacgaattcacctcgccaatcccg
aatacccatcgtggccagaatggcgaaagaattgcgggggacgggcgcgacgacgcatcc
tcgacaaccagcccggactatgccagcactcgtccctcgaccgacacccaggaatccgca
gaacggccacgtgccggcgtgctgaaagtcgtgggcagtagtggtgatacttccgcggac
aaagagtacgacattcccgagatcaatttcggtccaaccctcaactacgccgcgcccgtc
ctcccaaccgacaaggcgccctccaagaaaactccgccctcgtccggtcggaaatcaccc
ggattccccaaggtgttttctcacactcgccaacagtcggatgacacgattcgtcggagt
gtcgtctggccaggcccctctgccgcatcatcctcgacagacaaccttgcgtcactcctc
caaccgcgcacgccacccgcgcaatatgcccaccatcgtgctccctcgacaggcactttg
accgactacaaggcctcccattcaagacacagttcggcagacctactcacctctggacgg
ctcagcggtcagtcacattcgcggcatagctcgctcgatcttttgtcctcggggcgacct
gctagccggggcgcggaaaacactctatcggggggggaagcgcccaagccgccctctagc
cgtgggccccttcactcccgaaacagctcagccgatcttctggctctcaaacgccctccc
agccggggagcggcagccgttttatcggccggccaggtgtcctcgcatctgtcggcccgc
gagcaggagcatgtcgcgcgagtcacaggcagcccgctgattgctttcgcgggcagcaag
ggcccctcacaaacgcaaagcggccttgttggcgcgatcgatgctagagagcgcgaaaaa
gctcagataaaacagggaattagcgggcaggcagtcgcgcaggccatcgatcagaggcag
cgggagcaaaatcagcaggctcaaagagcagcgcaggtcgcatatgctcagcaacaggcc
cagtttgctgcccagcaaatgccaatccgcccgcagactcctgggggcagaggcatgatg
atgggcgggggaatgccggctccatacggccctcaaagccctgcacgcccgcaaacgccg
ggcgccaggggcatgatgatggacggtggcgcgcctatgccgttttcgcctcctatgggt
ggcatgaactcccggagcatgagtccggctcctggcatgatgagcccccccgggcgtttc
gggccggcgccgccgcagccaccctcgcacatgatgccacacgccccatacggcggtggc
gctccaaccgggcccggttggaacatgggcaacgcgccgcaccgacagggacctcacggg
caccatgggcccatgatgccctcgccgggcatgggctttgctatgcagcagggtgggcgc
ccgcagtcacccggattccagctgcctcctcaaggtcaatacgcgcggccggggactcct
ggcggtccaagaccgggaacaccgggtcgcatgcagtaccatggccaagccttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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