KEGG   Thermothelomyces thermophilus: MYCTH_2310999
Entry
MYCTH_2310999     CDS       T02231                                 
Name
(RefSeq) hypothetical protein
  KO
K12599  antiviral helicase SKI2 [EC:3.6.4.13]
Organism
mtm  Thermothelomyces thermophilus
Pathway
mtm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYCTH_2310999
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtm03019]
    MYCTH_2310999
Messenger RNA biogenesis [BR:mtm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     MYCTH_2310999
  mRNA degradation factors
   3'-5' decay
    Ski complex
     MYCTH_2310999
SSDB
Motif
Pfam: DSHCT Ski2_N DEAD MTR4_beta-barrel MTR4-like_stalk ResIII Helicase_C
Other DBs
NCBI-GeneID: 11506175
NCBI-ProteinID: XP_003666375
JGI: 2310999
UniProt: G2QMF0
Position
6:complement(3547846..3551748)
AA seq 1300 aa
MASELSEAMQALHLLDGDLPFDAIDDIFDKTVSPSRQQQAQDPDQLRAELEAKYLSPSAT
FSSDWLDKLQQRWAAPADYSLLFRIAPTQSRTVTRFIRHGLEGRVTGYRNVTVPASHATA
KSSTSMLRKPASRADFVRGAAGFFPFAPGGLEGIESTAALEDQLRAPSAPGTGEGDSRKK
LEKVIKLGEGGLLEIPPGLDRGIDFSKRRKLADADSERQAKEVEEVLGQEPEDAPGGEGE
QEGGDNGDKNDGGGGEDDDDDDEAMEEDIDSILPVEFPALEPRGTLAASSARKAGREWAH
MVDVNREMPNFRELVPDMAREWPFELDTFQKEAIYHLENGDSVFVAAHTSAGKTVVAEYA
IALAAKHMTKAIYTSPIKALSNQKFRDFRQTFDEVGILTGDVQINPEASCLIMTTEILRS
MLYRGADLIRDVEFVIFDEVHYVNDFERGVVWEEVIIMLPEHVSLILLSATVPNTYEFAS
WVGRTKQKDIYVISTPKRPVPLEHYLWGNKNIYKIVDSDKKFLEKGWKEANAAIQGKDKQ
KALPQAAAAPARGGGSGANGRGGRGGSQRGGNQQRGGSRGGGQQRGRGGGPPRASHAPGH
LGRTGRPGGFTTAAQDRNLWVHLVQFLKKGNLLPACIFVFSKKRCEENADALSNQDFCTA
QEKSAIHMTIEKSIARLKPEDRVLPQIIRIREMLSRGIAVHHGGLLPIVKELVEILFAQT
LVKVLFATETFAMGLNLPTRTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVGS
VIIVPPGGDEAPPVSDLRQMILGEPSKLRSQFRLTYNMILNLLRVEALKIEEMIKRSFSE
HATQQLLPEHEKAVKLSEADLAKVKRDPCPICDAHMDECHQAGEDFKRLTEELYRMLLVN
PIGRKMFATGRLIVWMKEGVRTPGILLSEGASVKSSATNPTLHVLEIRTNREMRNDTDLL
PFVPAFRKHLTPLPQAKKHISTKTLHVPISDLVCLTKHVTKGVVPDIFGGGEGYAKAKEK
LHMICRSWNSDIWDEMDLGRVKNLAVHEIAAKRREAEIKVAKSPAAECKSFLKHYAMCHD
QWLIQTHIQQLRQTLSEQNLQLLPDYEQRIQVLKDLSFIDDASRIQLKGKVACEVHSGDE
LVLTELILENVLADYDPAEIAALLSAFVFQEKTESVPRLTANLERGMKTIVDISERVNAV
QTLHQVIQTSDESNDFVSKPRFGLMEVVYEWARGMSFKNITDLTDVLEGTIVRTITRLDE
TCREVKNAARIIGDPDLYQKMAAAQEMIRRDITAVASLYM
NT seq 3903 nt   +upstreamnt  +downstreamnt
atggcatctgaacttagcgaagccatgcaggcgctgcatcttctcgacggcgacctcccc
tttgacgcaatcgacgacatcttcgacaagaccgtcagcccgtcccggcaacaacaagca
caagacccggaccagctgcgcgccgagctcgaggccaagtacctatctccctcggccacc
ttctccagcgactggctcgacaagctgcagcagcgctgggccgcccccgccgactactcg
ctcctcttccgtatcgccccgacccagtcgcgcaccgtcacccgcttcatccgccacggc
ctcgagggccgcgtcaccggctaccgcaatgtcaccgttccggcctcccacgccaccgcc
aagtcgagcacctccatgctgcgcaagcccgccagccgcgccgacttcgtccgcggcgcc
gccggcttcttccccttcgcccccggtggcctggagggcatcgagtcgaccgcagcgctc
gaggaccagctgcgcgccccgtccgctcccgggaccggcgagggcgacagccggaagaag
ctggagaaggtcatcaagctgggcgagggcggcttgctcgagatccctcccgggctcgac
cgcggcatcgactttagcaagaggcggaagctggccgacgccgacagcgagcgccaggcc
aaggaggtcgaggaggtgttgggccaggagcccgaggatgcgcccggcggcgagggggag
caggagggcggcgacaatggggacaaaaacgacggcggcggcggcgaggacgacgacgac
gacgacgaggccatggaggaggatattgactccatcctgcccgtcgagttccccgctctc
gagccccgcggcacgctcgccgcgtccagcgctagaaaggccggccgcgagtgggcccac
atggtcgacgtcaaccgggagatgcccaacttccgggagctggtgccggatatggccagg
gagtggcccttcgagctggacacgttccagaaggaggccatctaccacctcgagaacggc
gactccgtcttcgtggccgcccacacctcggccggcaagaccgtggtggccgaatatgcc
atcgccctcgcggccaaacacatgaccaaggccatctacacgtcgcccatcaaggcgctg
agcaaccagaagttccgcgacttcaggcagacctttgacgaggtcggtatcctgacgggc
gacgtgcagatcaaccccgaggccagctgtctcatcatgacgaccgagattctccgcagc
atgctctaccgcggcgccgacctgatccgcgatgtcgagtttgtcatcttcgacgaggtg
cactacgtcaacgactttgagcgcggcgtcgtctgggaagaggtcatcatcatgctgccc
gagcacgtctccttgatcctcctgtccgccaccgtgcccaacacctacgagttcgcctcc
tgggttggccggacgaagcagaaggacatctacgtcatctccacgccgaagcggcccgtc
cctctggagcactatctctggggcaacaagaacatctacaagatcgtcgactcggacaag
aagttcctcgagaagggctggaaagaagccaacgcggcgatccaaggcaaggataagcag
aaggcgcttccccaagccgcagcggctccggctcgcggcggcggaagcggcgccaacggg
aggggtggtcgcggcggctcgcagaggggcggtaaccagcagcgtggcggtagccggggc
ggcggtcagcaacggggcagaggcggcgggccgcctcgcgcaagccatgcgcctggccac
ttgggccgcacagggcgacctggcggattcacgacggccgctcaggacaggaacctctgg
gtccatttggtgcagttcctgaagaaggggaaccttcttccggcctgcatcttcgtcttc
tccaagaaacgctgcgaggagaatgccgacgccctgagcaaccaggacttctgcaccgcc
caggagaagagcgcgatacacatgaccatcgagaaatcgatcgcgcgcttgaagccggag
gaccgcgttctcccccagatcatcaggattagggagatgctctcccgcggcatcgccgtc
caccacggcggactgcttccgatcgtgaaggagctcgtggaaattctgttcgcccagacg
ctggtcaaggttctcttcgccaccgagaccttcgccatgggcctgaaccttcctaccagg
accgtcgtcttctccggctaccggaagcacgatggccattcgttccgcaacctccttccc
ggcgagtacacccagatggccggcagagcggggaggcgcggtcttgatacggtcggctcc
gtcatcatcgtcccgcccggcggagacgaggcacctcccgtctccgacctccggcagatg
atactcggcgagcctagcaagctccggtcacagttccggctcacctacaacatgatcctc
aacctcctccgcgtcgaggcgctcaagatcgaagaaatgattaagcgcagtttctcagag
cacgccacgcagcagctcctgcccgagcacgagaaggcggtgaagctatccgaggccgac
ctggccaaggtcaagcgcgacccttgcccgatctgcgacgcccatatggacgaatgtcat
caggcgggcgaggacttcaagcggctgacggaggagctgtaccgcatgctgctggtcaac
ccgatcggccgcaagatgttcgcgacggggcggttgatcgtgtggatgaaggaaggcgtg
cgcacgcccggcattctcctctccgagggggccagcgtcaagagcagcgcgaccaacccg
acgctgcacgtcctcgagatacggacaaaccgcgagatgcgcaacgatacggatctgctg
cctttcgtgcccgccttccggaagcatctcaccccgctgccgcaagccaagaagcacatc
tcgaccaagacactgcacgtccccatttcggacctcgtgtgcctcaccaagcatgtcacc
aagggtgtcgtgccagatatctttggtggcggcgagggctacgccaaggcgaaggagaag
ctgcacatgatctgccgctcgtggaactcggacatttgggacgagatggacctgggccgc
gtcaagaacctggcagtgcacgagatcgccgccaagcggcgcgaggccgagatcaaggtg
gccaagtcgcccgcggccgagtgcaagtccttcctgaagcattacgccatgtgccacgac
cagtggctcatccagacgcacatccagcagctccgccagaccctgtcggagcaaaacctg
cagctcctgcccgactacgagcagcgcatccaggtgctcaaggacctctccttcatcgac
gacgccagccgcatccagctcaagggcaaggtcgcctgcgaggtgcactcgggcgacgag
ctggtgctgacggagctgatactggagaacgtgctggccgactacgacccggccgagatc
gccgcgctgctgtcggccttcgtcttccaggagaagacggagtcggtcccgcgcctgacg
gccaacctggagcggggcatgaagaccatcgtcgacatctcggagcgcgtcaacgcggtc
cagacgctgcaccaggtcatccagacgagcgacgagagcaacgacttcgtgtccaagccg
cgcttcggcctcatggaggtcgtctacgagtgggcccgcggcatgagcttcaagaacatc
accgacctgaccgacgtgctcgagggcaccatcgtccgcaccatcacccgcctcgacgag
acgtgccgcgaggtcaagaacgcggcccgcatcattggcgacccggacctctaccagaag
atggcggccgcccaggagatgatcaggcgggatatcacggcggtggcgagcttgtacatg
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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