KEGG T00417: Mthe

Methanosaeta thermophila: Mthe_0844

Entry

Mthe_0844 CDS T00417

Definition

DNA ligase I, ATP-dependent Dnl1 (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

mtp Methanosaeta thermophila

Pathway

mtp03030	DNA replication
mtp03410	Base excision repair
mtp03420	Nucleotide excision repair
mtp03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:mtp03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:mtp03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:mtp03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:mtp03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(910878..912536)

AA seq 552 aa
MTGFARFAELCERISQTSGSLEKTDILASFLSDLESDDLRIVAGFVMGVVIPGTELGVGP
SLLYESISRATGLSSDAVNELLRATGDPGLVAYRAVERRKPLTLAAFSGSEGLEVQDVYQ
RFLSIAKASGRGSQEIRVKNLQYMFSEASPLEAKYIARLAMEDMRIGVGEGLVRDAIAKA
FGVSKEDVERAYNLTNDLGLVAEYAKLGRLNELGISINRPIKMMLAQIGESIEASLAEGA
TAVEWKFDGARVQIHKDKGNVRIFSRRLEDVTSSLPEIREIVRGHVRARTAILDGEAVAT
GEDGRPLPFQEILRRFRRKYGVARTAKTIPLKLHLFDIIYMDGASLLDEPLEERRRVLVS
VADPEIIAEQVVTSDVHRVEEIYREALAAGHEGVMLKNPSSTYTPGKRGKNWLKIKPLLE
SLDLVVIGARWGEGKRANLLGSYRLACIDTDTGELKDVGWVATGITDEMLAELTELFREL
IVKENGMEVEVHPEIVFEVGYEEIQRSPNYSSGYALRFPRLIAVRDDKSPSEADTLERIG
EIYRLQRGRSKK

NT seq 1659 nt +upstreamnt +downstreamnt
atgacaggcttcgcgagattcgcagagctctgcgagcggatatcacaaacatcaggctct
cttgagaagacagacatactggcatccttcctatcagatctggaatcagatgatcttaga
atcgttgcaggcttcgtcatgggtgtcgtcataccgggaacagagctcggtgtcggccca
agccttctctacgagtccatatccagggcaacaggcctgagcagcgatgcagtaaatgag
ctcctgcgtgccaccggagatcccgggcttgtcgcgtacagagcggtcgagaggagaaaa
ccgctcacgcttgcggcattctccggaagcgaggggctcgaggtacaggatgtctatcag
aggtttctctcgatagcaaaggcctccggcaggggcagtcaggagatcagggtgaagaat
cttcagtacatgttcagtgaggcctcgccgctggaggcaaagtacatcgccaggctcgcg
atggaggacatgaggataggcgtcggcgaggggctcgtaagggatgcgattgcaaaggca
tttggtgtgtctaaagaggatgtggagagggcgtacaacctgacgaatgatctggggctg
gtcgcagagtacgcgaagctcggaaggctgaacgagctggggataagcataaaccgtccg
atcaagatgatgctggctcagatcggtgagagcatcgaggcctctctcgcagagggcgcg
acagcagtggaatggaagttcgatggcgccagggtccagatccataaggataagggaaat
gtgagaatattctcccgcagacttgaggatgtcacatcgtccctgcccgagataagggag
atcgtgagggggcatgtcagggcgaggacagcaatcctcgatggggaggctgtggcaaca
ggcgaggacgggcggccgctcccgttccaggagatactaaggaggttccgcaggaagtac
ggagtcgcgaggactgcgaagacgatacccctgaaactgcacctcttcgacataatatac
atggacggggcgagccttcttgatgaacctctggaggagaggcggagggtcctcgtcagc
gtggcggatcctgagatcatagctgagcaggtagtgacgagcgatgtccacagggtggag
gagatctacagagaggcgcttgcagccgggcacgagggcgtgatgctcaagaatccctca
tcgacgtacactccgggcaagaggggcaagaactggctcaagatcaaaccgctcctcgaa
tccctggatctcgttgtgatcggcgcacggtggggggaagggaagagagcgaaccttctc
ggctcttacaggctcgcctgcatcgacaccgataccggggagctgaaggatgtcggctgg
gtcgcaacagggatcacggatgagatgctcgcggagctcaccgagctcttccgggagctg
atagtcaaggagaacgggatggaggtggaggttcatccggagatcgtcttcgaggtgggc
tatgaggagatccagaggagccccaattactcatccggctacgccctgcgttttccaagg
ctgatcgccgtcagggatgataaatcaccatctgaagctgatacgcttgagaggattggc
gagatatatcggcttcagaggggcagatccaaaaaatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-MTP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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