KEGG   Mycobacterium tuberculosis HKBS1: HKBS1_3383
Entry
HKBS1_3383        CDS       T03154                                 
Name
(GenBank) UvrD/Rep family helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
mtq  Mycobacterium tuberculosis HKBS1
Pathway
mtq03420  Nucleotide excision repair
mtq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mtq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HKBS1_3383
   03430 Mismatch repair
    HKBS1_3383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtq03400]
    HKBS1_3383
Enzymes [BR:mtq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HKBS1_3383
DNA repair and recombination proteins [BR:mtq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HKBS1_3383
   MMR (mismatch excision repair)
    Other MMR factors
     HKBS1_3383
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PDDEXK_1 AAA_19 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: AHJ44029
Position
complement(3562161..3565466)
AA seq 1101 aa
MTQTAAPARYSPAELACALGLFPPTAEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWL
VANGYAEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGIGLGCGDPAACAPVVSTYHAFAG
SLLRDYGLLLPLEPDTRLLSETELWQLAFDVVSGYDGVLCTDKSPAAVTSIVVRLWGQLG
EHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVPLLDALGE
RMHAGKVMDFAMQMASAARLAATSPQVGRDLRRRYRVVLLDEYQDTGHAQRVVLSSLFGG
GVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPLSDGTPAPVLELLTSWRNPPQAL
RVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEAD
GVKPPTAAVLVRRNADAAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVADPTA
GAAAMRVLTGPRWRLGARDLAALWRRALTLSGESPSTASPESIAMAASADADNPCLADAI
SDPGSAEGYSVAGYGRIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSG
GWAGPEHLDAFADVVAGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRV
QVLTVHAAKGLEWQVVAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPV
LDTSAVADRKQLSDKISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKP
RGPSEFLCELKDIIDRSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARR
GDVERGAALVAAAMSADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLP
NHLSVSSLVELVGDPVGARQRLMCRLPKRPDPHAWLGDAFHAWVQQFYGAELLFDLGDLP
GAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGG
ATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITVVPDE
LPAPGELAMLLTDCAGRRSDT
NT seq 3306 nt   +upstreamnt  +downstreamnt
atgacccaaaccgcggcaccggcacgctacagtccagctgaactagcctgcgcgctagga
cttttcccgcccaccgctgagcaggccgcggtaatcgccgcacctcccggcccgctggtc
gtcatcgcgggagccggcgccggaaaaaccgaaacgatggctgcccgggtggtgtggctg
gttgccaacggctacgcggaacccggccaggtgctgggattgacgttcacccgcaaggcc
gcgggccagctgttgcgccgcgttcggtcccgtctggccaggttggccggtatcggcctc
ggctgcggcgacccggcggcctgcgctccggtagtcagcacctaccacgcctttgccggc
tcgctactacgcgactacggcctgctgctaccgctggaacccgataccaggttgctgagc
gagaccgagctgtggcagctggcattcgatgtggtcagcgggtacgacggcgtgctgtgc
accgacaagagcccggcggcggtcacctcgatcgtggtgcggttatggggccagcttggc
gagcatctggtcgacacccgcgcgcttcgcgacacccacgtcgagctggaacggctggtc
cacgctctgccggcgggccgctatcagcgtgaccgcggccccagccagtggctgctgcgg
atgctggccacccagacccagcgcgcggagttggtgccgttgcttgacgcgttgggtgag
cggatgcacgccggcaaagtgatggatttcgccatgcagatggcctcggccgcacggttg
gcggcgacctctccccaagttggccgggatctgcggaggcgctaccgggtggtgttactg
gacgaataccaggacacggggcacgcgcagcgcgttgtgttgtcgtcgctgtttggcggc
ggcgttgatgacgggttggcgctgacggctgtcggtgacccgattcagtcgatctacggg
tggcgcggcgcttcggcgacgaacctgccccggttcaccaccgacttccccttatcggac
ggcacccccgcgccggtgctggagctgctgaccagctggcgcaacccgccgcaagcgctg
cgcgtggccaatggcatatcggcggaggcgcggcggcgctcggttgcggtgcgcgcgttg
cggccgcgtccggatgccccgcctggagccgtccgctgcgcgttgcttcccgacgtgcag
gccgaacgcgaatggatcgccgaccacttgcggatgcgttaccagcgggcagaagcggac
ggtgtcaagccgcccaccgcggcggtgctggtacgccgcaacgccgacgccgccgctatc
gctgataccctgcgggcccgcggaatcccggctgaagttgtcgggctggccggcctactg
tccatccccgaggtcgccgaggtggtggccatgctgcgcctggttgccgacccaacggcc
ggggcggccgcgatgcgggtgctgactggcccacggtggcggctcggcgcccgggacctc
gccgcgctgtggcggcgtgcgctgacgctgagtggcgaatcaccgtcaacggcgtcgccc
gaatcgatcgcgatggcggccagcgcggacgccgacaatccgtgtctggccgacgccatc
agcgatccaggttccgccgaggggtattcggtggcgggatatgggcgcatcggcgccttg
gccggtgaactgagcgcgctgcgcggtcgcctcggtcattccctgcccgacctagtagcc
gaggtgcgccgcgtgcttggcgtcgattgcgaggtgcgggcctcggccccggtctcaggt
ggctgggccggacccgagcaccttgatgcgttcgccgacgtggtcgcggggtacgccgaa
cgggccagcgctaggtccagcgaggcgtcggttgcgggcctgctggcttatttggacgtc
gccgaggtggtcgagaacggtttgccgcctgccgagttgaccgtcgcctgcgaccgggtc
caggtgctgaccgtgcacgccgccaagggcttggaatggcaggtggtggcggtggcacac
ctgtcgcgcggagtgtttccgtcgacggtgtcgcgcagcagctggcttaccgaccccgcc
gaactaccgccgctgctgcgtggggatcgcgcctcggccggcgcgcacggcatccccgta
ctggacacgtcagctgtcgctgaccgaaaacagttgtcggacaagatctccgaacatcgt
cgcctgctcgatcggcggcgcgttgacgaggagcgtcgactgttgtacgtggccgttacc
cgggctgaggacactctgctggtgtccggccaccattgggggcccaccgggacaaagccg
cgcgggccatcggaattcctgtgcgaactcaaggacatcattgaccgttcggccgctgcc
ggtgatccttgcggagtcgtcgagcagtgggcgtcggcgcccgccggcgatgagcgaaac
ccattgtgtgacaacgctatcgaggcggtttggcccgctgatccgttggccgcacgtcgc
ggcgatgtggagcggggcgcggcgctggtggcggcggccatgtcggccgacttgcccgga
agcaccaccgacatcgatcatcccccgcgcccgggcgatgccccctggtccactgacgtc
gatgcactgttggctgaacgtgcgcacgcggcgcggggagcacctgcccgtggtctgccg
aaccatttgtcggtcagcagtttggtggagctggtcggcgacccggtcggtgcgcggcag
cggctgatgtgtcggctgccaaaacgcccggacccgcacgcgtggttgggcgatgcattt
cacgcctgggttcagcaattttacggtgctgaactgctgtttgacctgggtgacctgcca
ggtgcagcggaccgcgaggtgggcgatcctgaggagttggccgcgttgcagagggcgttc
accgcatcatcgtgggcggctcgcaccccggcggcggtcgaagtgccgttcgaaatgccg
atcggcgataccgtggtgcgcggccgcatcgacgcggtgttcgtcgaccccgacggcggt
gccaccgtggtggactggaagaccggcaagccgccgcacgggccggcagccatgcggcag
gccgctgtccagctcgctgtctatcgactggcctgggccgcattgcggggatgtccgaca
tcctcggtgcgtaccgccttctattacgtgcgcagcggcatcacggtcgtccccgacgag
ttacccgctcccggcgagttggccatgctactgaccgactgcgccggtcggcggtcggac
acctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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