KEGG T01716: MTR

Medicago truncatula (barrel medic): MTR_2g038030

Entry

MTR_2g038030 CDS T01716

Definition

DNA ligase

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

mtr Medicago truncatula (barrel medic)

Pathway

mtr03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:mtr03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT PTCB-BRCT DNA_ligase_IV

Other DBs

NCBI-GI:

357449599

NCBI-GeneID:

11441582

UniProt:

G7IG89

Position

AA seq 1244 aa
MTELTKFSVLCSLFTWTQRTKAPAKKRAKFRKFLDNFCTDRNYFPAIRLILPNLDRERGS
YGLKESVLATSLIDALGMAKDSHDALRLVNWRKGGAKTGANAGNFALVAAEVLQLRQGTA
SGGLTIKELNDLLDQLSSSENRGEKTLVLSTLIQKTNALEMKWIIMIILKDLKLGISERS
IFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANAADAWK
KLHGKEVVAECKFDGDRIQIHKNGTEIHFFSRNFIDHSEYAHGMSEIIIQNILVDRCILD
GEMLVWDTSLNRFAEFGSNQEIAKAARDGLESNRQFIQDALTQKWLDVAFDILYFGDTSV
IHQTLKERHEILRKVVKPLKGRFEILLPNGGINNHRSSGEPCWSFIAHNAEEVERFFKET
IENREEGIVVKDLSSKWEPSDRSGKWLKLKPDYVHAGSDLDVLIIGGYYGSGRHGGEVAQ
FLVGLAERPSPNTHPKRFISLCRVGTGLSDDELEAVVTKLKPYFRKYPKTSPPSFYQVTN
HSKERPDVWVDSPEKSIILSVTSDIRTIESEAFAAPYSLRFPRIDRVRYDKDWHECLDVQ
SFIELVQSGNGTTQRNTEYGSNKDSKPKRMKSSTRGEKKNMSTVPSHLSQTDVSSVTGGS
LMFSNMMFCILKNLANFVNVPPSHSLESFHKLVAENGGTFSMNLNNAVTHCVAADSKGFK
FEAAKRRGDIIHYTWVLDCCAQKKLIPLHLKYFLFLSELTKKKLQEDIDEFSDSYYLDLD
LGDIKQLLSNINRSEDVSTVDHYRKKYCPKDKWSIFNGCSIYFRTTMPSLKEDWQILLEL
SSKRFKVEVLMGGGKVTSNLNSATHVVALFLPSCHTNYEDEIQSSFTSVERKLLGRKRLH
IINSKWLEDCLNSCQRLSEDTYSIKPYGIEESTSEDCEHALAVDAHLIKKDNVEDQNVSI
SNKGSKQSSVKAASEDSLTLASQAKVGPRKRGRPPGRSITKIKTDTNQARRVRSQIAKKR
AKISEYESDESDSLDKRPYEQEADNVEGSLDFHYVRSQPHETEKIHNVQGGTEGVESSEQ
NKGIGLEDFKDNQHENMFVPEIEMKDADNDQSSQVTEKLEIMTDPVQAMLLDMIPGLSMN
KVEQPRNHHVEAEKPPEISNEEPSSTTKKKKVSFKALADEPLSSCGIIIKMFYEVVLHPT
TTSKMVSEPLQDPLGYLLSGFRYRATHHLCPRTKANSAGRERVC

NT seq 3735 nt +upstreamnt +downstreamnt
atgacagaacttacaaaattcagcgtcctatgcagcctctttacatggacacaacgaaca
aaagcaccagcgaagaaacgcgcaaagttccggaagtttctggacaacttctgcactgat
cggaactattttccggccattcgactcattctacctaaccttgatcgtgaacgtggttct
tatgggcttaaagaatctgttcttgctacttctcttattgatgctcttggaatggcgaaa
gactcgcacgatgctcttaggcttgttaattggaggaaaggtggtgccaaaactggtgct
aatgccggtaatttcgcgcttgtcgccgcagaggtgctgcagcttaggcaaggtactgct
tcaggtggactgacaataaaggagttgaatgacttgcttgatcaattgtcttcgagcgaa
aacaggggtgagaagactttggttctttcaacccttatccaaaagacaaatgcgctagaa
atgaagtggatcatcatgataatcctcaaagatttgaagctcggaattagtgaaagaagc
atttttcatgaatttcatccagatgctgaagacttgttcaatgttacgtgtgacttaaaa
ctagtttgtgagaagctaagggatcggaaccaacgtcataagcggcaggatattgaagtt
ggaaaagctgtgcgtcctcaattagctaagagagttgctaacgcagctgacgcatggaag
aagcttcatggtaaggaagtggttgctgagtgcaaatttgacggtgatcgcattcaaatt
cataaaaatggaacggagatacattttttctcaaggaactttattgatcattctgaatat
gctcatgggatgtcagaaatcataattcaaaacattcttgtcgatagatgcatacttgat
ggtgaaatgttggtctgggatacatccttgaatcgatttgctgagtttggctctaatcag
gaaatagccaaggcagcaagggatgggcttgagagtaatagacagtttatccaagatgcc
ttgactcaaaaatggttagatgtggcatttgacatcctttattttggagataccagtgta
attcatcaaacattgaaggagcggcatgagattttacgtaaagttgttaagccattgaaa
ggtcgttttgaaattttactacctaatggtggtatcaacaatcatcggtcttctggtgaa
ccatgttggtcgtttattgctcacaatgcggaggaagttgaaagatttttcaaagaaacc
attgaaaatagagaggagggaattgtagtaaaagacctcagctccaaatgggaacctagt
gaccgcagtggaaaatggctaaagttgaagcctgattacgttcatgctggctctgatctg
gacgtacttatcataggtggctactatggttccggacgacatgggggagaggttgctcaa
ttcttggtgggccttgcagagcgtccatcaccaaatacacatcccaagcgatttatctcc
ttatgcagagttggtactggactttctgatgatgagcttgaagcagtagtgaccaaacta
aaaccttacttcagaaagtatccaaagacgagcccgccaagtttttatcaagttactaat
cattccaaagaaagacctgatgtgtgggtcgatagccctgaaaaatcaattattctgtct
gtaaccagtgacatccgaaccatagaatcagaggcattcgctgcaccttactctctgaga
tttcctcggattgacagggtgagatatgacaaggattggcatgaatgccttgatgtacaa
tcatttatagaattggtgcaatctggcaacggtaccacacagaggaatacagaatatggg
agcaacaaggacagtaaaccaaaacgcatgaaatcctctacaaggggagaaaagaaaaac
atgtctactgttccctctcatttaagtcagactgatgtttccagtgttacgggaggttcc
ttaatgttttcaaatatgatgttctgtatcctgaaaaatcttgctaactttgttaatgtc
cctccatctcattcgctagagtccttccacaaattagttgctgagaatgggggcactttc
tcaatgaatttaaataacgcagtcactcattgtgttgcagcagatagcaaagggtttaaa
tttgaagcagcaaaacgtcgtggtgatatcattcattatacttgggtattagattgctgt
gcacaaaagaagctcatccccttacatctgaagtacttcctctttctttctgaactgacc
aagaagaagttacaagaagatattgatgagttctcggactcttactacttggatctcgac
cttggagacatcaaacagctcttaagtaatattaataggtcagaagatgtcagtactgtc
gaccattacaggaaaaaatactgcccaaaggataagtggtctatctttaatggatgctcc
atttatttccgcaccacaatgccatcattgaaagaagattggcaaattctattggaactt
tcctcgaagagattcaaagttgaagttctcatgggtggtggaaaagtcacatctaatctc
aactccgcaactcatgtggtggccttgttcttaccaagttgtcataccaactatgaagac
gaaatacagagtagtttcacttcagttgagagaaaacttcttggaagaaagaggttgcat
ataattaattccaagtggttagaagattgtttaaacagttgccaaagattatcagaagac
acttatagcattaagccctatggaatagaagagtcaacttctgaggattgtgaacatgcc
ttggcggtagatgctcatctgatcaaaaaagataatgtagaagaccaaaacgtatccatc
tctaacaagggaagtaaacagagtagtgtaaaagctgcttctgaagacagtttaactttg
gcatcccaagcgaaggttggaccaaggaaaagaggaagacctccaggcagaagtattaca
aaaataaaaacagacacaaatcaagctcgaagagttcgatcacagattgcgaaaaagcgt
gccaaaatatctgagtatgaatcagatgaaagtgattctctcgataaaagaccatacgag
caagaggctgacaatgtagaaggaagtcttgattttcactacgtacgttcacaaccacac
gagactgagaaaattcataatgtccaaggtggtactgaaggagtagaaagttctgaacaa
aacaagggaatcgggctagaggatttcaaggacaaccaacatgaaaatatgtttgttccc
gaaattgaaatgaaagatgcggacaatgaccaaagtagtcaggtgactgaaaaacttgaa
attatgactgatcctgtacaggcaatgttacttgacatgattcctggcctttctatgaac
aaagttgagcaacctaggaatcatcatgtcgaggcagagaagccaccagaaatctctaat
gaagagccttcttcaactacaaagaaaaagaaagttagcttcaaggctctcgctgatgaa
cctctttcgagctgtggtataattataaagatgttttatgaggttgtgttacacccaact
acgacttctaaaatggtatcagagcctcttcaagatccattgggctacctgctatcaggt
tttcgctatcgggccacccaccatttatgtccacgaaccaaggccaatagtgctggtcgt
gagagggtgtgttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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