KEGG   Microbacterium testaceum: MTES_3480
Entry
MTES_3480         CDS       T01423                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mts  Microbacterium testaceum
Brite
KEGG Orthology (KO) [BR:mts00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mts03016]
    MTES_3480
Enzymes [BR:mts01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     MTES_3480
Transfer RNA biogenesis [BR:mts03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    MTES_3480
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: BAJ76444
UniProt: E8NF01
Position
complement(3770442..3771638)
AA seq 398 aa
MVEYLVIEDAAGLAQASDRLAAGTGPVAVDVERASGFRYSQRAYLIQVFRRDAGVFLFDP
STIEDFSPLQAALADVEWVFHAASQDLPSLRERGLEPPRIFDTELGARLLGHERVGLGAV
VEQTLGITLAKAHSAADWSTRPLPASWLEYAALDVEHLIDVRDVLVAELEEQQKTEFARQ
EFQAVLERLPKPPREDPWRRMSGLHTVRGRRALAVARALWQAREEYAREQDVAPGRLVPD
RALIAAVLADPASKQALAGVKEFNGRASRTQLDRWWNAIVAGREDTDLPPDRVPSDTLPP
PRAWVDRNPEADRRLKAARPAVEARAAELSMPTENLLTPETLRRVAWAPPAEVTVETIGA
ALSGLGARPWQIDQTAQVIADSFVASLNVVDDVPATDS
NT seq 1197 nt   +upstreamnt  +downstreamnt
gtggttgagtacttggtcatcgaggatgccgccggcctggcgcaggcatccgatcggctt
gcggcgggcaccggtccggtcgcggtcgacgtcgagcgcgcgtcggggttccgatactcc
cagcgggcgtatctcatccaggtgttccgccgcgacgcgggtgtcttcctgttcgaccct
tcgacgatcgaggacttctccccgctgcaggcagcgctcgccgacgtcgagtgggtcttc
cacgcggcgagccaggacctgccttcgctgcgcgagcgggggctcgaacccccgcggatc
ttcgacaccgagctgggtgcgcgtcttctcggtcacgagcgcgtcggactcggcgcggtc
gtcgagcagacgctcggcatcactctcgcgaaggcccactcggccgcggactggtcgacg
cgtcctctgccggcatcctggctcgagtacgccgctctcgatgtcgagcacctgatcgac
gtccgcgacgtgctggtcgccgagctcgaggagcagcagaagaccgagttcgcccgccag
gagttccaggcggttctcgagcgtctgccgaagccgccacgggaagacccctggcggcgc
atgagcgggctccacaccgtgcgggggcgtcgtgccctcgccgttgctcgcgcgctctgg
caagcgcgcgaggagtacgcccgcgagcaggacgtcgctccggggcgtctcgtgcccgat
cgcgcgctcatcgccgccgtgctggcggatccggcgagcaagcaggcgctggccggggtc
aaggagttcaacgggcgcgccagccgaacccagctggaccgctggtggaacgccatcgtg
gccggtcgcgaggacacggaccttccgcccgaccgcgtgccgagcgacaccttgccgcca
ccccgcgcgtgggtcgaccgcaaccccgaggccgatcgtcggttgaaggccgctcggccc
gccgtcgaggcgcgcgcggcagagctgagcatgccgacggagaacctcctcaccccggag
acgcttcgccgcgtggcgtgggcgccgcccgccgaggtgacggtcgagaccatcggcgcg
gctctgtccggccttggcgcgcgcccctggcagattgaccagaccgcacaggtgatcgcg
gatagctttgtagcttccctcaacgtcgttgacgacgtccccgccacggattcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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