KEGG M.tuberculosis: Rv0667

Mycobacterium tuberculosis H37Rv: Rv0667

Entry

Rv0667 CDS M.tuberculosis

Gene name rpoB

Definition DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)

Orthology K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]

Pathway mtu00230 Purine metabolism
mtu00240 Pyrimidine metabolism
mtu01100 Metabolic pathways
mtu03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:mtu00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:mtu00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:mtu03020]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45
RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 Peptidase_M23
PROSITE: RNA_POL_BETA NLS_BP

Other DBs NCBI-GI: 15607807
NCBI-GeneID: 888164
Sanger: Rv0667
Pasteur: Rv0667
UniProt: P0A680

Position 759807..763325

AA seq 1172 aa
MADSRQSKTAASPSPSRPQSSSNNSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFEWLIG
SPRWRESAAERGDVNPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDDVKAPVDECKDKD
MTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVY
FDETIDKSTDKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSE
QIVERFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRY
DLARVGRYKVNKKLGLHVGEPITSSTLTEEDVVATIEYLVRLHEGQTTMTVPGGVEVPVE
TDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINIRPVVAA
IKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPI
ETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVSDEIVYLTADEEDRHVVAQANS
PIDADGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHDDANRAL
MGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEESGVIEEVSADYITVMHDNGT
RRTYRMRKFARSNHGTCANQCPIVDAGDRVEAGQVIADGPCTDDGEMALGKNLLVAIMPW
EGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNISDEVLADLDE
RGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGK
VIGIRVFSREDEDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPF
LADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDAAKGVPDWAARLPDELLEA
QPNAIVSTPVFDGAQEAELQGLLSCTLPNRDGDVLVDADGKAMLFDGRSGEPFPYPVTVG
YMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQ
ELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIE
LREGEDEDLERAAANLGINLSRNESASVEDLA

NT seq 3519 nt +upstreamnt +downstreamnt
ttggcagattcccgccagagcaaaacagccgctagtcctagtccgagtcgcccgcaaagt
tcctcgaataactccgtacccggagcgccaaaccgggtctccttcgctaagctgcgcgaa
ccacttgaggttccgggactccttgacgtccagaccgattcgttcgagtggctgatcggt
tcgccgcgctggcgcgaatccgccgccgagcggggtgatgtcaacccagtgggtggcctg
gaagaggtgctctacgagctgtctccgatcgaggacttctccgggtcgatgtcgttgtcg
ttctctgaccctcgtttcgacgatgtcaaggcacccgtcgacgagtgcaaagacaaggac
atgacgtacgcggctccactgttcgtcaccgccgagttcatcaacaacaacaccggtgag
atcaagagtcagacggtgttcatgggtgacttcccgatgatgaccgagaagggcacgttc
atcatcaacgggaccgagcgtgtggtggtcagccagctggtgcggtcgcccggggtgtac
ttcgacgagaccattgacaagtccaccgacaagacgctgcacagcgtcaaggtgatcccg
agccgcggcgcgtggctcgagtttgacgtcgacaagcgcgacaccgtcggcgtgcgcatc
gaccgcaaacgccggcaaccggtcaccgtgctgctcaaggcgctgggctggaccagcgag
cagattgtcgagcggttcgggttctccgagatcatgcgatcgacgctggagaaggacaac
accgtcggcaccgacgaggcgctgttggacatctaccgcaagctgcgtccgggcgagccc
ccgaccaaagagtcagcgcagacgctgttggaaaacttgttcttcaaggagaagcgctac
gacctggcccgcgtcggtcgctataaggtcaacaagaagctcgggctgcatgtcggcgag
cccatcacgtcgtcgacgctgaccgaagaagacgtcgtggccaccatcgaatatctggtc
cgcttgcacgagggtcagaccacgatgaccgttccgggcggcgtcgaggtgccggtggaa
accgacgacatcgaccacttcggcaaccgccgcctgcgtacggtcggcgagctgatccaa
aaccagatccgggtcggcatgtcgcggatggagcgggtggtccgggagcggatgaccacc
caggacgtggaggcgatcacaccgcagacgttgatcaacatccggccggtggtcgccgcg
atcaaggagttcttcggcaccagccagctgagccaattcatggaccagaacaacccgctg
tcggggttgacccacaagcgccgactgtcggcgctggggcccggcggtctgtcacgtgag
cgtgccgggctggaggtccgcgacgtgcacccgtcgcactacggccggatgtgcccgatc
gaaacccctgaggggcccaacatcggtctgatcggctcgctgtcggtgtacgcgcgggtc
aacccgttcgggttcatcgaaacgccgtaccgcaaggtggtcgacggcgtggttagcgac
gagatcgtgtacctgaccgccgacgaggaggaccgccacgtggtggcacaggccaattcg
ccgatcgatgcggacggtcgcttcgtcgagccgcgcgtgctggtccgccgcaaggcgggc
gaggtggagtacgtgccctcgtctgaggtggactacatggacgtctcgccccgccagatg
gtgtcggtggccaccgcgatgattcccttcctggagcacgacgacgccaaccgtgccctc
atgggggcaaacatgcagcgccaggcggtgccgctggtccgtagcgaggccccgctggtg
ggcaccgggatggagctgcgcgcggcgatcgacgccggcgacgtcgtcgtcgccgaagaa
agcggcgtcatcgaggaggtgtcggccgactacatcactgtgatgcacgacaacggcacc
cggcgtacctaccggatgcgcaagtttgcccggtccaaccacggcacttgcgccaaccag
tgccccatcgtggacgcgggcgaccgagtcgaggccggtcaggtgatcgccgacggtccc
tgtactgacgacggcgagatggcgctgggcaagaacctgctggtggccatcatgccgtgg
gagggccacaactacgaggacgcgatcatcctgtccaaccgcctggtcgaagaggacgtg
ctcacctcgatccacatcgaggagcatgagatcgatgctcgcgacaccaagctgggtgcg
gaggagatcacccgcgacatcccgaacatctccgacgaggtgctcgccgacctggatgag
cggggcatcgtgcgcatcggtgccgaggttcgcgacggggacatcctggtcggcaaggtc
accccgaagggtgagaccgagctgacgccggaggagcggctgctgcgtgccatcttcggt
gagaaggcccgcgaggtgcgcgacacttcgctgaaggtgccgcacggcgaatccggcaag
gtgatcggcattcgggtgttttcccgcgaggacgaggacgagttgccggccggtgtcaac
gagctggtgcgtgtgtatgtggctcagaaacgcaagatctccgacggtgacaagctggcc
ggccggcacggcaacaagggcgtgatcggcaagatcctgccggttgaggacatgccgttc
cttgccgacggcaccccggtggacattattttgaacacccacggcgtgccgcgacggatg
aacatcggccagattttggagacccacctgggttggtgtgcccacagcggctggaaggtc
gacgccgccaagggggttccggactgggccgccaggctgcccgacgaactgctcgaggcg
cagccgaacgccattgtgtcgacgccggtgttcgacggcgcccaggaggccgagctgcag
ggcctgttgtcgtgcacgctgcccaaccgcgacggtgacgtgctggtcgacgccgacggc
aaggccatgctcttcgacgggcgcagcggcgagccgttcccgtacccggtcacggttggc
tacatgtacatcatgaagctgcaccacctggtggacgacaagatccacgcccgctccacc
gggccgtactcgatgatcacccagcagccgctgggcggtaaggcgcagttcggtggccag
cggttcggggagatggagtgctgggccatgcaggcctacggtgctgcctacaccctgcag
gagctgttgaccatcaagtccgatgacaccgtcggccgcgtcaaggtgtacgaggcgatc
gtcaagggtgagaacatcccggagccgggcatccccgagtcgttcaaggtgctgctcaaa
gaactgcagtcgctgtgcctcaacgtcgaggtgctatcgagtgacggtgcggcgatcgaa
ctgcgcgaaggtgaggacgaggacctggagcgggccgcggccaacctgggaatcaatctg
tcccgcaacgaatccgcaagtgtcgaggatcttgcgtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   PASTEUR-MTU (1)   
   SANGER-MTU (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (7)   
   PROSITE (2)   
All databases (27)

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